Chain sequence(s) |
A: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | GR16A |
Energy difference between WT (input) and mutated protein (by FoldX) | 3.71878 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:21) [INFO] FoldX: Starting FoldX energy minimalization (00:00:38) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01) [INFO] Main: Simulation completed successfully. (00:01:02) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | K | A | -1.4319 | |
2 | V | A | 0.0990 | |
3 | F | A | 0.0000 | |
4 | G | A | -1.0152 | |
5 | R | A | -1.2975 | |
6 | C | A | -1.0679 | |
7 | E | A | -1.1085 | |
8 | L | A | 0.0000 | |
9 | A | A | 0.0000 | |
10 | A | A | -1.2973 | |
11 | A | A | -1.5349 | |
12 | M | A | 0.0000 | |
13 | K | A | -2.3826 | |
14 | R | A | -2.8300 | |
15 | H | A | -2.5868 | |
16 | R | A | -3.2905 | mutated: GR16A |
17 | L | A | 0.0000 | |
18 | D | A | -2.4014 | |
19 | N | A | -2.3657 | |
20 | Y | A | -1.9710 | |
21 | R | A | -2.3153 | |
22 | G | A | -1.7552 | |
23 | Y | A | -1.1685 | |
24 | S | A | -1.2259 | |
25 | L | A | 0.0000 | |
26 | G | A | 0.0000 | |
27 | N | A | -1.0845 | |
28 | W | A | 0.0000 | |
29 | V | A | 0.0000 | |
30 | C | A | 0.0000 | |
31 | A | A | 0.0000 | |
32 | A | A | 0.0000 | |
33 | K | A | -1.3209 | |
34 | F | A | -0.7569 | |
35 | E | A | -0.7511 | |
36 | S | A | 0.0000 | |
37 | N | A | -1.3925 | |
38 | F | A | 0.0000 | |
39 | N | A | -1.1086 | |
40 | T | A | 0.0000 | |
41 | Q | A | -1.4427 | |
42 | A | A | -1.1647 | |
43 | T | A | -1.3775 | |
44 | N | A | -1.9873 | |
45 | R | A | -2.7858 | |
46 | N | A | -2.2416 | |
47 | T | A | -1.6399 | |
48 | D | A | -2.4435 | |
49 | G | A | -2.0698 | |
50 | S | A | 0.0000 | |
51 | T | A | 0.0000 | |
52 | D | A | -1.3451 | |
53 | Y | A | 0.0000 | |
54 | G | A | 0.0000 | |
55 | I | A | 0.0000 | |
56 | L | A | 0.0000 | |
57 | Q | A | -0.5946 | |
58 | I | A | 0.0000 | |
59 | N | A | -1.2668 | |
60 | S | A | 0.0000 | |
61 | R | A | -2.2664 | |
62 | W | A | -0.8004 | |
63 | W | A | 0.0000 | |
64 | C | A | 0.0000 | |
65 | N | A | -2.6221 | |
66 | D | A | -2.2067 | |
67 | G | A | -1.8021 | |
68 | R | A | -2.2286 | |
69 | T | A | -2.1581 | |
70 | P | A | -1.6471 | |
71 | G | A | -1.3268 | |
72 | S | A | -2.0655 | |
73 | R | A | -2.4726 | |
74 | N | A | -1.7470 | |
75 | L | A | -0.5348 | |
76 | C | A | -0.9811 | |
77 | N | A | -1.4804 | |
78 | I | A | -0.7962 | |
79 | P | A | -1.1412 | |
80 | C | A | 0.0000 | |
81 | S | A | -0.6200 | |
82 | A | A | -0.4660 | |
83 | L | A | 0.0000 | |
84 | L | A | -1.0409 | |
85 | S | A | -1.3468 | |
86 | S | A | -1.5929 | |
87 | D | A | -2.1189 | |
88 | I | A | 0.0000 | |
89 | T | A | -1.2000 | |
90 | A | A | -0.8682 | |
91 | S | A | 0.0000 | |
92 | V | A | 0.0000 | |
93 | N | A | -1.9004 | |
94 | C | A | 0.0000 | |
95 | A | A | 0.0000 | |
96 | K | A | -2.0183 | |
97 | K | A | -2.0321 | |
98 | I | A | 0.0000 | |
99 | V | A | 0.0000 | |
100 | S | A | -2.2278 | |
101 | D | A | -2.7496 | |
102 | G | A | -2.1491 | |
103 | N | A | -2.1397 | |
104 | G | A | -1.9069 | |
105 | M | A | 0.0000 | |
106 | N | A | -1.3381 | |
107 | A | A | -0.6605 | |
108 | W | A | 0.0000 | |
109 | V | A | 0.2157 | |
110 | A | A | -0.9893 | |
111 | W | A | 0.0000 | |
112 | R | A | -3.0429 | |
113 | N | A | -2.9616 | |
114 | R | A | -3.1435 | |
115 | C | A | 0.0000 | |
116 | K | A | -3.1461 | |
117 | G | A | -2.2478 | |
118 | T | A | -2.3869 | |
119 | D | A | -2.4591 | |
120 | V | A | 0.0000 | |
121 | Q | A | -2.0557 | |
122 | A | A | -1.5835 | |
123 | W | A | -1.0722 | |
124 | I | A | -1.0585 | |
125 | R | A | -2.2202 | |
126 | G | A | -1.4008 | |
127 | C | A | -1.2307 | |
128 | R | A | -1.4872 | |
129 | L | A | -0.0342 |