Project name: 1AD9

Status: done

Started: 2026-03-30 04:26:22
Settings
Chain sequence(s) H: EIQLVQSGAEVKKPGSSVKVSCKASGYTFTDYYINWMRQAPGQGLEWIGWIDPGSGNTKYNEKFKGRATLTVDTSTNTAYMELSSLRSEDTAFYFCAREKTTYYYAMDYWGQGTLVTVSS
L: DIQMTQSPSTLSASVGDRVTITCRSSKSLLHSNGDTFLYWFQQKPGKAPKLLMYRMSNLASGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCMQHLEYPFTFGQGTKVEVK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:14)
Show buried residues

Minimal score value
-3.3904
Maximal score value
1.5674
Average score
-0.6047
Total score value
-140.2822

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9630
2 I H -0.9278
3 Q H -1.0314
4 L H 0.0000
5 V H 0.2806
6 Q H 0.0000
7 S H -0.5147
8 G H -0.5056
9 A H 0.2494
11 E H 0.1752
12 V H 1.0581
13 K H -0.8541
14 K H -2.1636
15 P H -2.2689
16 G H -1.6262
17 S H -1.2815
18 S H -1.3905
19 V H 0.0000
20 K H -2.0086
21 V H 0.0000
22 S H -0.4669
23 C H 0.0000
24 K H -0.6352
25 A H 0.0000
26 S H -0.8572
27 G H -1.0938
28 Y H -0.7369
29 T H -0.6341
30 F H 0.0000
35 T H -1.1479
36 D H -1.8571
37 Y H -0.7317
38 Y H -0.3522
39 I H 0.0000
40 N H 0.0000
41 W H 0.0000
42 M H 0.0000
43 R H 0.0000
44 Q H 0.0000
45 A H -0.7551
46 P H -0.8527
47 G H -1.1900
48 Q H -1.7659
49 G H -1.1849
50 L H 0.0000
51 E H -0.7354
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 W H -0.2365
56 I H 0.0000
57 D H -1.0689
58 P H 0.0000
59 G H -1.2549
62 S H -1.0142
63 G H -1.1646
64 N H -1.7272
65 T H -0.9827
66 K H -1.1798
67 Y H -1.3011
68 N H -1.9840
69 E H -3.3904
70 K H -3.2242
71 F H 0.0000
72 K H -3.2965
74 G H -2.0546
75 R H -1.8530
76 A H 0.0000
77 T H -0.9429
78 L H 0.0000
79 T H -0.3770
80 V H -0.1948
81 D H -0.6490
82 T H -0.6012
83 S H -0.4903
84 T H -0.6086
85 N H -0.8363
86 T H 0.0000
87 A H 0.0000
88 Y H -0.3949
89 M H 0.0000
90 E H -1.4056
91 L H 0.0000
92 S H -1.2062
93 S H -1.3206
94 L H 0.0000
95 R H -3.1289
96 S H -2.3306
97 E H -2.4799
98 D H 0.0000
99 T H -0.6638
100 A H 0.0000
101 F H 0.6571
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 E H 0.0000
108 K H -0.0639
109 T H 0.2850
110 T H 0.4883
111 Y H 1.5674
112 Y H 1.1249
113 Y H 0.7732
114 A H 0.0000
115 M H 0.0000
116 D H -0.3441
117 Y H -0.0341
118 W H -0.3778
119 G H 0.0000
120 Q H -1.3295
121 G H -0.5478
122 T H 0.0000
123 L H 0.7972
124 V H 0.0000
125 T H -0.0758
126 V H 0.0000
127 S H -1.1824
128 S H -1.0406
1 D L -2.3627
2 I L 0.0000
3 Q L -2.3175
4 M L 0.0000
5 T L -1.4039
6 Q L 0.0000
7 S L -0.6649
8 P L -0.5051
9 S L -0.8843
10 T L -1.0839
11 L L -0.6758
12 S L -0.9315
13 A L 0.0000
14 S L -0.1449
15 V L 0.7370
16 G L -0.5348
17 D L -1.2988
18 R L -2.2021
19 V L 0.0000
20 T L -0.5559
21 I L 0.0000
22 T L -0.8346
23 C L 0.0000
24 R L -2.7960
25 S L 0.0000
26 S L -2.0451
27 K L -2.0798
28 S L -0.9811
29 L L 0.0000
30 L L 0.0087
31 H L -0.8836
32 S L -1.0629
34 N L -1.6912
35 G L -1.1829
36 D L -0.8315
37 T L 0.0000
38 F L 0.0000
39 L L 0.0000
40 Y L 0.0000
41 W L 0.0000
42 F L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.7663
46 P L -1.2019
47 G L -1.6007
48 K L -2.5853
49 A L -1.5268
50 P L 0.0000
51 K L -1.4428
52 L L 0.0000
53 L L 0.0000
54 M L 0.0000
55 Y L 0.1510
56 R L -0.0836
57 M L -0.1752
65 S L -0.3577
66 N L -0.0981
67 L L 0.2359
68 A L 0.0000
69 S L -0.4029
70 G L -0.5298
71 V L 0.0000
72 P L -0.3559
74 S L -0.3773
75 R L -0.7495
76 F L 0.0000
77 S L -0.3324
78 G L -0.2967
79 S L -0.6995
80 G L -1.0428
83 S L -0.5878
84 G L -0.8057
85 T L -1.5527
86 E L -2.2366
87 F L 0.0000
88 T L -0.7476
89 L L 0.0000
90 T L -0.6015
91 I L 0.0000
92 S L -1.3454
93 S L -1.1748
94 L L 0.0000
95 Q L -1.3485
96 P L -0.7767
97 D L -1.9428
98 D L 0.0000
99 F L -0.6591
100 A L 0.0000
101 T L 0.0000
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 M L 0.0000
106 Q L 0.0000
107 H L 0.0000
108 L L -0.3231
109 E L -1.0844
114 Y L -0.5923
115 P L -1.0379
116 F L 0.0000
117 T L -0.7220
118 F L -0.3272
119 G L 0.0000
120 Q L -1.5203
121 G L 0.0000
122 T L 0.0000
123 K L -2.2148
124 V L 0.0000
125 E L -1.3660
126 V L 0.5576
127 K L -0.9895
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Laboratory of Theory of Biopolymers 2018