| Chain sequence(s) |
H: EIQLVQSGAEVKKPGSSVKVSCKASGYTFTDYYINWMRQAPGQGLEWIGWIDPGSGNTKYNEKFKGRATLTVDTSTNTAYMELSSLRSEDTAFYFCAREKTTYYYAMDYWGQGTLVTVSS
L: DIQMTQSPSTLSASVGDRVTITCRSSKSLLHSNGDTFLYWFQQKPGKAPKLLMYRMSNLASGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCMQHLEYPFTFGQGTKVEVK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:13)
[INFO] Main: Simulation completed successfully. (00:01:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9630 | |
| 2 | I | H | -0.9278 | |
| 3 | Q | H | -1.0314 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.2806 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.5147 | |
| 8 | G | H | -0.5056 | |
| 9 | A | H | 0.2494 | |
| 11 | E | H | 0.1752 | |
| 12 | V | H | 1.0581 | |
| 13 | K | H | -0.8541 | |
| 14 | K | H | -2.1636 | |
| 15 | P | H | -2.2689 | |
| 16 | G | H | -1.6262 | |
| 17 | S | H | -1.2815 | |
| 18 | S | H | -1.3905 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -2.0086 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.4669 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.6352 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8572 | |
| 27 | G | H | -1.0938 | |
| 28 | Y | H | -0.7369 | |
| 29 | T | H | -0.6341 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.1479 | |
| 36 | D | H | -1.8571 | |
| 37 | Y | H | -0.7317 | |
| 38 | Y | H | -0.3522 | |
| 39 | I | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | M | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | A | H | -0.7551 | |
| 46 | P | H | -0.8527 | |
| 47 | G | H | -1.1900 | |
| 48 | Q | H | -1.7659 | |
| 49 | G | H | -1.1849 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7354 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | W | H | -0.2365 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -1.0689 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -1.2549 | |
| 62 | S | H | -1.0142 | |
| 63 | G | H | -1.1646 | |
| 64 | N | H | -1.7272 | |
| 65 | T | H | -0.9827 | |
| 66 | K | H | -1.1798 | |
| 67 | Y | H | -1.3011 | |
| 68 | N | H | -1.9840 | |
| 69 | E | H | -3.3904 | |
| 70 | K | H | -3.2242 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.2965 | |
| 74 | G | H | -2.0546 | |
| 75 | R | H | -1.8530 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.9429 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3770 | |
| 80 | V | H | -0.1948 | |
| 81 | D | H | -0.6490 | |
| 82 | T | H | -0.6012 | |
| 83 | S | H | -0.4903 | |
| 84 | T | H | -0.6086 | |
| 85 | N | H | -0.8363 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3949 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.4056 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.2062 | |
| 93 | S | H | -1.3206 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.1289 | |
| 96 | S | H | -2.3306 | |
| 97 | E | H | -2.4799 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6638 | |
| 100 | A | H | 0.0000 | |
| 101 | F | H | 0.6571 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | E | H | 0.0000 | |
| 108 | K | H | -0.0639 | |
| 109 | T | H | 0.2850 | |
| 110 | T | H | 0.4883 | |
| 111 | Y | H | 1.5674 | |
| 112 | Y | H | 1.1249 | |
| 113 | Y | H | 0.7732 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.3441 | |
| 117 | Y | H | -0.0341 | |
| 118 | W | H | -0.3778 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.3295 | |
| 121 | G | H | -0.5478 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 0.7972 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0758 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.1824 | |
| 128 | S | H | -1.0406 | |
| 1 | D | L | -2.3627 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3175 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4039 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6649 | |
| 8 | P | L | -0.5051 | |
| 9 | S | L | -0.8843 | |
| 10 | T | L | -1.0839 | |
| 11 | L | L | -0.6758 | |
| 12 | S | L | -0.9315 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.1449 | |
| 15 | V | L | 0.7370 | |
| 16 | G | L | -0.5348 | |
| 17 | D | L | -1.2988 | |
| 18 | R | L | -2.2021 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5559 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8346 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.7960 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -2.0451 | |
| 27 | K | L | -2.0798 | |
| 28 | S | L | -0.9811 | |
| 29 | L | L | 0.0000 | |
| 30 | L | L | 0.0087 | |
| 31 | H | L | -0.8836 | |
| 32 | S | L | -1.0629 | |
| 34 | N | L | -1.6912 | |
| 35 | G | L | -1.1829 | |
| 36 | D | L | -0.8315 | |
| 37 | T | L | 0.0000 | |
| 38 | F | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | Y | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.7663 | |
| 46 | P | L | -1.2019 | |
| 47 | G | L | -1.6007 | |
| 48 | K | L | -2.5853 | |
| 49 | A | L | -1.5268 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.4428 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | M | L | 0.0000 | |
| 55 | Y | L | 0.1510 | |
| 56 | R | L | -0.0836 | |
| 57 | M | L | -0.1752 | |
| 65 | S | L | -0.3577 | |
| 66 | N | L | -0.0981 | |
| 67 | L | L | 0.2359 | |
| 68 | A | L | 0.0000 | |
| 69 | S | L | -0.4029 | |
| 70 | G | L | -0.5298 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.3559 | |
| 74 | S | L | -0.3773 | |
| 75 | R | L | -0.7495 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3324 | |
| 78 | G | L | -0.2967 | |
| 79 | S | L | -0.6995 | |
| 80 | G | L | -1.0428 | |
| 83 | S | L | -0.5878 | |
| 84 | G | L | -0.8057 | |
| 85 | T | L | -1.5527 | |
| 86 | E | L | -2.2366 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7476 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6015 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3454 | |
| 93 | S | L | -1.1748 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.3485 | |
| 96 | P | L | -0.7767 | |
| 97 | D | L | -1.9428 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.6591 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | 0.0000 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | M | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | 0.0000 | |
| 108 | L | L | -0.3231 | |
| 109 | E | L | -1.0844 | |
| 114 | Y | L | -0.5923 | |
| 115 | P | L | -1.0379 | |
| 116 | F | L | 0.0000 | |
| 117 | T | L | -0.7220 | |
| 118 | F | L | -0.3272 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.5203 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.2148 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.3660 | |
| 126 | V | L | 0.5576 | |
| 127 | K | L | -0.9895 |