| Chain sequence(s) |
H: EVQLVESGGGLIQPGGSLRLSCAASGFIVSSNYMSWVRQAPGKGLEWVSIIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLQELGSLDYWGQGTLVTVSS
L: DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQEANSFPYTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0510 | |
| 2 | V | H | -1.0839 | |
| 3 | Q | H | -0.8568 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2298 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.0960 | |
| 8 | G | H | -0.3422 | |
| 9 | G | H | 0.2856 | |
| 11 | G | H | 0.8732 | |
| 12 | L | H | 1.4824 | |
| 13 | I | H | 0.3705 | |
| 14 | Q | H | -0.9399 | |
| 15 | P | H | -1.1301 | |
| 16 | G | H | -1.2343 | |
| 17 | G | H | -1.1681 | |
| 18 | S | H | -1.2279 | |
| 19 | L | H | -0.8301 | |
| 20 | R | H | -1.6320 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2366 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0126 | |
| 25 | A | H | 0.1377 | |
| 26 | S | H | -0.4554 | |
| 27 | G | H | -0.8017 | |
| 28 | F | H | 0.0000 | |
| 29 | I | H | 1.3399 | |
| 30 | V | H | 0.0000 | |
| 35 | S | H | -0.2119 | |
| 36 | S | H | 0.1100 | |
| 37 | N | H | 0.2705 | |
| 38 | Y | H | 0.0271 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6470 | |
| 45 | A | H | -1.0093 | |
| 46 | P | H | -0.8156 | |
| 47 | G | H | -1.4535 | |
| 48 | K | H | -2.3619 | |
| 49 | G | H | -1.6149 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9520 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | I | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.0034 | |
| 58 | S | H | -0.2215 | |
| 59 | G | H | -0.6895 | |
| 63 | G | H | -0.6727 | |
| 64 | S | H | -0.2128 | |
| 65 | T | H | 0.2382 | |
| 66 | F | H | 0.5149 | |
| 67 | Y | H | -0.4814 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.4263 | |
| 70 | S | H | -1.7591 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4992 | |
| 74 | G | H | -1.8135 | |
| 75 | R | H | -1.7160 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.9203 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.6049 | |
| 80 | R | H | -1.1136 | |
| 81 | D | H | -1.7160 | |
| 82 | N | H | -1.9394 | |
| 83 | S | H | -1.8433 | |
| 84 | K | H | -2.2453 | |
| 85 | N | H | -1.2502 | |
| 86 | T | H | -0.7103 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.5259 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.5464 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.9494 | |
| 93 | S | H | -1.4273 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -1.3133 | |
| 96 | V | H | 0.1146 | |
| 97 | E | H | -1.3600 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.2045 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7162 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.1467 | |
| 107 | D | H | 0.0000 | |
| 108 | L | H | -0.0821 | |
| 109 | Q | H | -0.7889 | |
| 110 | E | H | -1.6197 | |
| 112 | L | H | -0.2846 | |
| 113 | G | H | 0.0000 | |
| 114 | S | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.5060 | |
| 118 | W | H | -0.0732 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2927 | |
| 121 | G | H | -0.3178 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.6256 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.7001 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.1937 | |
| 128 | S | H | -0.2944 | |
| 1 | D | L | -2.0056 | |
| 2 | I | L | -1.5851 | |
| 3 | Q | L | -2.1215 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4649 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7678 | |
| 8 | P | L | -0.5591 | |
| 9 | S | L | -0.8675 | |
| 10 | S | L | -0.9233 | |
| 11 | V | L | -0.7184 | |
| 12 | S | L | -1.0205 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.7051 | |
| 15 | V | L | 0.2026 | |
| 16 | G | L | -0.6409 | |
| 17 | D | L | -1.5463 | |
| 18 | R | L | -2.2144 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5844 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8605 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8692 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9689 | |
| 27 | Q | L | -2.2987 | |
| 28 | G | L | -1.6567 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.8703 | |
| 37 | S | L | -0.4975 | |
| 38 | W | L | -0.0314 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.7138 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.6450 | |
| 46 | P | L | -1.1825 | |
| 47 | G | L | -1.6605 | |
| 48 | K | L | -2.5636 | |
| 49 | A | L | -1.4926 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.9582 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.4957 | |
| 56 | A | L | 0.1484 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.1997 | |
| 66 | S | L | 0.0920 | |
| 67 | L | L | 0.2833 | |
| 68 | Q | L | -0.1691 | |
| 69 | S | L | -0.3967 | |
| 70 | G | L | -0.5697 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.4179 | |
| 74 | S | L | -0.4642 | |
| 75 | R | L | -0.7939 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3387 | |
| 78 | G | L | -0.2381 | |
| 79 | S | L | -0.6631 | |
| 80 | G | L | -1.0369 | |
| 83 | S | L | -1.0718 | |
| 84 | G | L | -1.3566 | |
| 85 | T | L | -1.9458 | |
| 86 | D | L | -2.3639 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7584 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6292 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3833 | |
| 93 | S | L | -1.1570 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7244 | |
| 96 | P | L | -0.8173 | |
| 97 | E | L | -1.6521 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2952 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8243 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | E | L | 0.0000 | |
| 107 | A | L | 0.0000 | |
| 108 | N | L | -0.9171 | |
| 109 | S | L | -0.3526 | |
| 114 | F | L | 0.2873 | |
| 115 | P | L | -0.4575 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | -0.7682 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.6475 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4851 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.3012 | |
| 126 | I | L | -0.5890 | |
| 127 | K | L | -1.5097 |