Project name: 7CJF

Status: done

Started: 2026-03-29 09:52:23
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Chain sequence(s) H: EVQLVESGGGLIQPGGSLRLSCAASGFIVSSNYMSWVRQAPGKGLEWVSIIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLQELGSLDYWGQGTLVTVSS
L: DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQEANSFPYTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:12)
Show buried residues

Minimal score value
-2.8692
Maximal score value
1.6256
Average score
-0.5197
Total score value
-116.9342

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0510
2 V H -1.0839
3 Q H -0.8568
4 L H 0.0000
5 V H 1.2298
6 E H 0.0000
7 S H -0.0960
8 G H -0.3422
9 G H 0.2856
11 G H 0.8732
12 L H 1.4824
13 I H 0.3705
14 Q H -0.9399
15 P H -1.1301
16 G H -1.2343
17 G H -1.1681
18 S H -1.2279
19 L H -0.8301
20 R H -1.6320
21 L H 0.0000
22 S H -0.2366
23 C H 0.0000
24 A H 0.0126
25 A H 0.1377
26 S H -0.4554
27 G H -0.8017
28 F H 0.0000
29 I H 1.3399
30 V H 0.0000
35 S H -0.2119
36 S H 0.1100
37 N H 0.2705
38 Y H 0.0271
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6470
45 A H -1.0093
46 P H -0.8156
47 G H -1.4535
48 K H -2.3619
49 G H -1.6149
50 L H 0.0000
51 E H -0.9520
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 I H 0.0000
56 I H 0.0000
57 Y H -0.0034
58 S H -0.2215
59 G H -0.6895
63 G H -0.6727
64 S H -0.2128
65 T H 0.2382
66 F H 0.5149
67 Y H -0.4814
68 A H 0.0000
69 D H -2.4263
70 S H -1.7591
71 V H 0.0000
72 K H -2.4992
74 G H -1.8135
75 R H -1.7160
76 F H 0.0000
77 T H -0.9203
78 I H 0.0000
79 S H -0.6049
80 R H -1.1136
81 D H -1.7160
82 N H -1.9394
83 S H -1.8433
84 K H -2.2453
85 N H -1.2502
86 T H -0.7103
87 L H 0.0000
88 Y H -0.5259
89 L H 0.0000
90 Q H -1.5464
91 M H 0.0000
92 N H -1.9494
93 S H -1.4273
94 L H 0.0000
95 R H -1.3133
96 V H 0.1146
97 E H -1.3600
98 D H 0.0000
99 T H 0.2045
100 A H 0.0000
101 V H 0.7162
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.1467
107 D H 0.0000
108 L H -0.0821
109 Q H -0.7889
110 E H -1.6197
112 L H -0.2846
113 G H 0.0000
114 S H 0.0000
115 L H 0.0000
116 D H 0.0000
117 Y H 0.5060
118 W H -0.0732
119 G H 0.0000
120 Q H -1.2927
121 G H -0.3178
122 T H 0.0000
123 L H 1.6256
124 V H 0.0000
125 T H 0.7001
126 V H 0.0000
127 S H -0.1937
128 S H -0.2944
1 D L -2.0056
2 I L -1.5851
3 Q L -2.1215
4 M L 0.0000
5 T L -1.4649
6 Q L 0.0000
7 S L -0.7678
8 P L -0.5591
9 S L -0.8675
10 S L -0.9233
11 V L -0.7184
12 S L -1.0205
13 A L 0.0000
14 S L -0.7051
15 V L 0.2026
16 G L -0.6409
17 D L -1.5463
18 R L -2.2144
19 V L 0.0000
20 T L -0.5844
21 I L 0.0000
22 T L -0.8605
23 C L 0.0000
24 R L -2.8692
25 A L 0.0000
26 S L -1.9689
27 Q L -2.2987
28 G L -1.6567
29 I L 0.0000
36 S L -0.8703
37 S L -0.4975
38 W L -0.0314
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.7138
44 Q L 0.0000
45 K L -1.6450
46 P L -1.1825
47 G L -1.6605
48 K L -2.5636
49 A L -1.4926
50 P L 0.0000
51 K L -0.9582
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.4957
56 A L 0.1484
57 A L 0.0000
65 S L -0.1997
66 S L 0.0920
67 L L 0.2833
68 Q L -0.1691
69 S L -0.3967
70 G L -0.5697
71 V L 0.0000
72 P L -0.4179
74 S L -0.4642
75 R L -0.7939
76 F L 0.0000
77 S L -0.3387
78 G L -0.2381
79 S L -0.6631
80 G L -1.0369
83 S L -1.0718
84 G L -1.3566
85 T L -1.9458
86 D L -2.3639
87 F L 0.0000
88 T L -0.7584
89 L L 0.0000
90 T L -0.6292
91 I L 0.0000
92 S L -1.3833
93 S L -1.1570
94 L L 0.0000
95 Q L -0.7244
96 P L -0.8173
97 E L -1.6521
98 D L 0.0000
99 F L -0.2952
100 A L 0.0000
101 T L -0.8243
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 E L 0.0000
107 A L 0.0000
108 N L -0.9171
109 S L -0.3526
114 F L 0.2873
115 P L -0.4575
116 Y L 0.0000
117 T L -0.7682
118 F L 0.0000
119 G L 0.0000
120 Q L -1.6475
121 G L 0.0000
122 T L 0.0000
123 K L -1.4851
124 L L 0.0000
125 E L -1.3012
126 I L -0.5890
127 K L -1.5097
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Laboratory of Theory of Biopolymers 2018