| Chain sequence(s) |
A: ECYTPGCTCSWPICTKNGSAILCGESCTLG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.2504 | |
| 2 | C | A | -0.3312 | |
| 3 | Y | A | 0.7802 | |
| 4 | T | A | 0.3256 | |
| 5 | P | A | -0.1924 | |
| 6 | G | A | -0.8700 | |
| 7 | C | A | 0.0000 | |
| 8 | T | A | -0.2388 | |
| 9 | C | A | 0.5801 | |
| 10 | S | A | 0.7498 | |
| 11 | W | A | 1.3473 | |
| 12 | P | A | 1.4240 | |
| 13 | I | A | 1.9088 | |
| 14 | C | A | 0.0000 | |
| 15 | T | A | -0.1953 | |
| 16 | K | A | -1.3901 | |
| 17 | N | A | -1.8803 | |
| 18 | G | A | -1.3131 | |
| 19 | S | A | -0.7683 | |
| 20 | A | A | 0.3330 | |
| 21 | I | A | 1.3354 | |
| 22 | L | A | 1.9042 | |
| 23 | C | A | 0.7008 | |
| 24 | G | A | -0.6338 | |
| 25 | E | A | -1.5729 | |
| 26 | S | A | -0.0777 | |
| 27 | C | A | 0.2230 | |
| 28 | T | A | 0.2928 | |
| 29 | L | A | 1.0594 | |
| 30 | G | A | 0.2971 |