Project name: 9_i14e7_x11e6_i20e6_x4e7

Status: done

Started: 2025-08-11 19:04:37
Settings
Chain sequence(s) A: AAYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:48)
Show buried residues

Minimal score value
-4.8061
Maximal score value
3.6948
Average score
-0.4436
Total score value
-114.8818

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2086
2 A A 0.0812
3 Y A 0.3931
4 R A -0.9150
5 A A 0.0637
6 H A 0.6953
7 Y A 1.7615
8 N A 1.4461
9 I A 3.1991
10 V A 3.5393
11 T A 2.9235
12 F A 3.6948
13 A A 2.7218
14 A A 2.1873
15 Y A 2.5225
16 T A 1.9450
17 L A 2.3496
18 Q A 1.1479
19 D A 0.5238
20 I A 2.4616
21 V A 3.1982
22 L A 2.6002
23 H A 1.9150
24 L A 3.2200
25 A A 2.8075
26 A A 2.6506
27 Y A 3.3769
28 L A 3.3911
29 L A 3.1614
30 M A 2.9538
31 G A 2.3061
32 T A 2.6628
33 L A 3.3668
34 G A 2.4518
35 I A 3.5992
36 V A 3.6703
37 A A 2.3367
38 A A 1.9929
39 Y A 2.1400
40 L A 0.9875
41 P A -0.5975
42 A A -1.1876
43 R A -2.8409
44 R A -3.2562
45 A A -2.6307
46 E A -3.1851
47 P A -2.3679
48 Q A -2.4747
49 A A -1.6267
50 A A -1.3768
51 Y A -0.8703
52 A A -1.4832
53 E A -3.0502
54 K A -2.8167
55 L A -2.0114
56 R A -3.9234
57 H A -3.9478
58 L A -3.0780
59 N A -3.8425
60 E A -4.3861
61 K A -4.1382
62 R A -4.5759
63 R A -3.9396
64 F A -1.6004
65 H A -2.6822
66 N A -2.7871
67 G A -1.7236
68 P A -1.0815
69 G A -1.0268
70 P A -0.5756
71 G A -0.4465
72 L A -0.3595
73 D A -2.3953
74 K A -3.4105
75 K A -3.8335
76 Q A -3.6428
77 R A -3.7065
78 F A -2.2722
79 H A -3.1232
80 N A -3.0930
81 I A -1.8140
82 R A -2.6482
83 G A -2.1781
84 R A -2.3135
85 W A -0.5131
86 T A -0.7803
87 G A -0.8475
88 P A -0.6943
89 G A -1.0905
90 P A -1.1086
91 G A -1.6560
92 N A -2.3357
93 P A -2.0128
94 A A -2.1967
95 E A -3.4874
96 K A -3.1535
97 L A -1.9225
98 R A -3.7198
99 H A -3.5640
100 L A -2.6154
101 N A -3.8528
102 E A -4.3549
103 K A -4.1494
104 R A -3.9094
105 R A -3.0616
106 F A -0.3554
107 G A -0.5722
108 P A -0.8645
109 G A -0.8866
110 P A -1.0926
111 G A -1.3473
112 S A -1.7042
113 K A -2.5730
114 I A -1.2510
115 S A -1.9141
116 E A -2.5626
117 Y A -1.2634
118 R A -1.8403
119 H A -1.1646
120 Y A 0.8966
121 C A 0.9854
122 Y A 1.3185
123 S A 1.2414
124 L A 2.3151
125 Y A 2.1506
126 G A 0.5805
127 G A -0.0664
128 P A -0.1845
129 G A -0.3489
130 P A -0.3963
131 G A -0.2823
132 V A 1.0691
133 Y A 1.0432
134 D A -0.1208
135 F A 1.4747
136 A A 1.0681
137 F A 1.7622
138 R A -0.0869
139 D A 0.0599
140 L A 0.4344
141 A A 0.0780
142 A A 0.0471
143 Y A 0.3662
144 R A -1.1238
145 F A -0.1510
146 H A -0.6381
147 N A -0.8256
148 I A 1.0773
149 A A 0.0000
150 G A 0.0523
151 H A 0.3307
152 Y A 1.7372
153 A A 0.0000
154 A A 1.2410
155 Y A 2.0979
156 C A 1.9109
157 Y A 1.8650
158 S A 1.5444
159 L A 2.1518
160 Y A 1.9774
161 G A 0.9771
162 T A 0.9740
163 T A 0.7528
164 L A 1.3437
165 A A 0.5213
166 A A 0.2286
167 Y A 0.5951
168 K A -0.7581
169 T A -0.4122
170 V A 0.3465
171 L A -0.3248
172 E A -1.1745
173 L A 0.9998
174 T A 0.6990
175 E A -0.0521
176 V A 2.0383
177 A A 1.7066
178 A A 1.4879
179 Y A 2.1880
180 L A 1.7134
181 L A 1.4915
182 C A 0.4427
183 H A -1.0263
184 E A -2.1993
185 Q A -2.4494
186 L A -2.0044
187 S A -3.2562
188 D A -4.1687
189 S A -3.5766
190 E A -4.4675
191 E A -4.7949
192 E A -4.8061
193 N A -4.1390
194 D A -3.7223
195 G A -2.2058
196 P A -1.3473
197 G A -1.1129
198 P A -1.0582
199 G A -1.3818
200 Q A -1.8112
201 S A -1.0167
202 T A -0.7880
203 H A -0.6294
204 V A 0.6840
205 D A -0.7992
206 I A 0.6093
207 R A -1.3164
208 T A -0.5942
209 L A 0.9216
210 E A -1.0546
211 D A -1.1151
212 L A 1.0628
213 L A 1.8758
214 M A 1.1279
215 G A 0.0318
216 P A -0.4701
217 G A -0.8519
218 P A -0.8794
219 G A -0.9038
220 T A -0.5861
221 P A -0.4814
222 T A 0.5371
223 L A 1.6838
224 H A -0.0251
225 E A -0.3711
226 Y A 1.2125
227 M A 1.3404
228 L A 0.6603
229 D A -0.8819
230 L A 0.4513
231 Q A -0.8874
232 P A -1.5265
233 E A -2.3627
234 T A -1.6118
235 G A -1.3624
236 P A -1.0845
237 G A -0.7653
238 P A -0.7767
239 G A -0.5619
240 L A 0.9954
241 Q A -0.1157
242 D A -0.2823
243 I A 2.4279
244 V A 2.7514
245 L A 1.8875
246 H A 0.6394
247 L A 1.0624
248 E A -1.4762
249 P A -2.0679
250 Q A -2.4503
251 N A -2.5273
252 E A -1.9672
253 I A 0.3216
254 P A -0.3028
255 G A -0.5731
256 P A -0.6522
257 G A -0.9806
258 P A -0.8211
259 G A -0.7376
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Laboratory of Theory of Biopolymers 2018