Project name: ccadc48a334d7dd

Status: done

Started: 2024-06-17 20:39:39
Settings
Chain sequence(s) A: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRLKVFGRCELAAAM
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:55)
Show buried residues

Minimal score value
-2.1832
Maximal score value
1.7739
Average score
-0.4172
Total score value
-58.8247

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -0.8754
2 V A 1.4948
3 F A 0.0000
4 G A -0.3996
5 R A -0.6747
6 C A -0.1968
7 E A -1.5645
8 L A 0.0000
9 A A 0.0000
10 A A 0.0098
11 A A 0.0101
12 M A 0.0000
13 K A -1.0312
14 R A -2.0304
15 H A -0.7236
16 G A -0.4138
17 L A 0.0000
18 D A -1.0748
19 N A -1.4099
20 Y A -0.2493
21 R A -1.8736
22 G A -0.9310
23 Y A -0.0350
24 S A -0.2095
25 L A 0.0000
26 G A 0.0000
27 N A -0.1234
28 W A 0.0000
29 V A 0.0000
30 C A 0.0000
31 A A 0.0000
32 A A 0.0000
33 K A -0.6423
34 F A 0.3187
35 E A -0.1663
36 S A 0.0000
37 N A -1.3549
38 F A 0.0000
39 N A -0.2091
40 T A 0.0000
41 Q A -1.1715
42 A A -0.2225
43 T A -0.2610
44 N A -1.6288
45 R A -2.1832
46 N A -0.8872
47 T A -0.4967
48 D A -1.8141
49 G A -0.3941
50 S A 0.0000
51 T A 0.0000
52 D A -0.2793
53 Y A 0.0735
54 G A 0.0000
55 I A 0.0000
56 L A 0.0000
57 Q A 0.0000
58 I A 0.0000
59 N A -0.3094
60 S A 0.0000
61 R A -1.3588
62 W A 0.2274
63 W A 0.2605
64 C A 0.0000
65 N A -1.0822
66 D A -0.6818
67 G A -0.8837
68 R A -1.9316
69 T A -0.3902
70 P A -0.3426
71 G A -0.5230
72 S A -0.6751
73 R A -1.8255
74 N A -0.5740
75 L A 0.3643
76 C A -0.0411
77 N A -1.2082
78 I A -0.0533
79 P A -0.3259
80 C A 0.0000
81 S A -0.2102
82 A A -0.0246
83 L A 0.0000
84 L A 0.0417
85 S A -0.0987
86 S A -0.5492
87 D A -1.8266
88 I A 0.0000
89 T A -0.0293
90 A A 0.0072
91 S A 0.0000
92 V A 0.0000
93 N A -1.2730
94 C A 0.0000
95 A A 0.0000
96 K A -0.5709
97 K A -1.2105
98 I A 0.0000
99 V A 0.0000
100 S A -0.4283
101 D A -1.8931
102 G A -1.0286
103 N A -1.3705
104 G A -0.2983
105 M A 0.0000
106 N A -0.5435
107 A A -0.0495
108 W A 0.0000
109 V A 1.7739
110 A A 0.3343
111 W A 0.0000
112 R A -2.0769
113 N A -1.9505
114 R A -2.0789
115 C A 0.0000
116 K A -1.5167
117 G A -0.7390
118 T A -0.4732
119 D A -1.8003
120 V A 0.0000
121 Q A -1.1890
122 A A -0.1294
123 W A 0.2997
124 I A 0.1276
125 R A -1.8523
126 G A -0.7876
127 C A -0.3207
128 R A -1.6740
129 L A 0.4867
1 K A -1.3763
2 V A 1.6199
3 F A 1.1336
4 G A -0.4436
5 R A -1.7593
6 C A 0.2443
7 E A -0.5804
8 L A 0.5555
9 A A 0.2748
10 A A 0.0800
11 A A 0.2598
12 M A 1.0640
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Laboratory of Theory of Biopolymers 2018