| Chain sequence(s) |
C: DARRKAEMLQNEAKTLLAQANSKLQQLKDLERKYEDNQRYLEDKAQELARLEGEVRSLLKDISQKVAVYSTCL
B: ENVERWQGQYEGLRGQDLGQAVLDAGHSVSTLEKTLPQLLAKLSILENRGVHNASLALSASIGRVRELCAQARGAASKVKV D: DTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIEEIMKCIRNLEDIRKTLPSGCFNTPSIEKP input PDB |
| Selected Chain(s) | B,C,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LQ16C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 1.95827 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:03:26)
[INFO] FoldX: Starting FoldX energy minimalization (00:03:54)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:10)
[INFO] Main: Simulation completed successfully. (00:07:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | B | -2.8729 | |
| 2 | N | B | -2.3170 | |
| 3 | V | B | -0.8212 | |
| 4 | E | B | -2.9636 | |
| 5 | R | B | -3.2710 | |
| 6 | W | B | -1.2774 | |
| 7 | Q | B | -1.8822 | |
| 8 | G | B | -2.4965 | |
| 9 | Q | B | -2.0969 | |
| 10 | Y | B | -1.6877 | |
| 11 | E | B | -2.8716 | |
| 12 | G | B | -2.0240 | |
| 13 | L | B | -1.1606 | |
| 14 | R | B | -2.9421 | |
| 15 | G | B | -2.9466 | |
| 16 | Q | B | -2.5061 | |
| 17 | D | B | -2.5499 | |
| 18 | L | B | -2.5085 | |
| 19 | G | B | -1.6112 | |
| 20 | Q | B | -1.5572 | |
| 21 | A | B | 0.0000 | |
| 22 | V | B | 0.0000 | |
| 23 | L | B | 0.0485 | |
| 24 | D | B | -1.0139 | |
| 25 | A | B | 0.0000 | |
| 26 | G | B | -1.0359 | |
| 27 | H | B | -1.2931 | |
| 28 | S | B | -1.3921 | |
| 29 | V | B | 0.0000 | |
| 30 | S | B | -1.5293 | |
| 31 | T | B | -1.7203 | |
| 32 | L | B | 0.0000 | |
| 33 | E | B | -3.1282 | |
| 34 | K | B | -2.8531 | |
| 35 | T | B | -1.8441 | |
| 36 | L | B | 0.0000 | |
| 37 | P | B | -1.5374 | |
| 38 | Q | B | -1.5204 | |
| 39 | L | B | 0.0000 | |
| 40 | L | B | -0.0808 | |
| 41 | A | B | -0.0050 | |
| 42 | K | B | -0.3739 | |
| 43 | L | B | 0.0000 | |
| 44 | S | B | -0.3267 | |
| 45 | I | B | 0.6154 | |
| 46 | L | B | 0.0000 | |
| 47 | E | B | -2.0171 | |
| 48 | N | B | -1.5214 | |
| 49 | R | B | -0.9000 | |
| 50 | G | B | -0.4779 | |
| 51 | V | B | 0.8582 | |
| 52 | H | B | 0.0574 | |
| 53 | N | B | -0.5652 | |
| 54 | A | B | 0.0000 | |
| 55 | S | B | 0.4182 | |
| 56 | L | B | 1.2987 | |
| 57 | A | B | 0.3354 | |
| 58 | L | B | 0.0000 | |
| 59 | S | B | -0.0528 | |
| 60 | A | B | -0.0386 | |
| 61 | S | B | -0.6836 | |
| 62 | I | B | 0.0000 | |
| 63 | G | B | -1.8920 | |
| 64 | R | B | -2.3713 | |
| 65 | V | B | 0.0000 | |
| 66 | R | B | -2.8585 | |
| 67 | E | B | -3.2142 | |
| 68 | L | B | 0.0000 | |
| 69 | C | B | 0.0000 | |
| 70 | A | B | -1.8853 | |
| 71 | Q | B | -2.0193 | |
| 72 | A | B | 0.0000 | |
| 73 | R | B | -2.1927 | |
| 74 | G | B | -1.5547 | |
| 75 | A | B | -1.6822 | |
| 76 | A | B | 0.0000 | |
| 77 | S | B | -1.6074 | |
| 78 | K | B | -2.2208 | |
| 79 | V | B | 0.0000 | |
| 80 | K | B | -1.2967 | |
| 81 | V | B | 0.6479 | |
| 1 | D | C | -2.6039 | |
| 2 | A | C | -2.3813 | |
| 3 | R | C | -3.2007 | |
| 4 | R | C | -3.2916 | |
| 5 | K | C | -2.4845 | |
| 6 | A | C | 0.0000 | |
| 7 | E | C | -2.8125 | |
| 8 | M | C | -1.8700 | |
| 9 | L | C | 0.0000 | |
| 10 | Q | C | -2.1827 | |
| 11 | N | C | -2.3555 | |
| 12 | E | C | -2.1740 | |
| 13 | A | C | 0.0000 | |
| 14 | K | C | -2.3020 | |
| 15 | T | C | -1.5968 | |
| 16 | Q | C | 0.0000 | mutated: LQ16C |
| 17 | L | C | -1.6240 | |
| 18 | A | C | -1.2071 | |
| 19 | Q | C | -1.6475 | |
| 20 | A | C | 0.0000 | |
| 21 | N | C | -1.7778 | |
| 22 | S | C | -1.7239 | |
| 23 | K | C | -2.0590 | |
| 24 | L | C | -1.8006 | |
| 25 | Q | C | -2.4254 | |
| 26 | Q | C | -2.0066 | |
| 27 | L | C | 0.0000 | |
| 28 | K | C | -2.5563 | |
| 29 | D | C | -2.7214 | |
| 30 | L | C | 0.0000 | |
| 31 | E | C | -2.6930 | |
| 32 | R | C | -3.7932 | |
| 33 | K | C | -3.4872 | |
| 34 | Y | C | -2.8958 | |
| 35 | E | C | -3.5651 | |
| 36 | D | C | -3.6797 | |
| 37 | N | C | 0.0000 | |
| 38 | Q | C | -2.4879 | |
| 39 | R | C | -3.1109 | |
| 40 | Y | C | -1.9251 | |
| 41 | L | C | 0.0000 | |
| 42 | E | C | -2.6713 | |
| 43 | D | C | -3.0289 | |
| 44 | K | C | -2.3135 | |
| 45 | A | C | -1.8722 | |
| 46 | Q | C | -2.7650 | |
| 47 | E | C | -2.5651 | |
| 48 | L | C | 0.0000 | |
| 49 | A | C | -1.9519 | |
| 50 | R | C | -2.7466 | |
| 51 | L | C | -1.7755 | |
| 52 | E | C | 0.0000 | |
| 53 | G | C | -2.0494 | |
| 54 | E | C | -2.4137 | |
| 55 | V | C | 0.0000 | |
| 56 | R | C | -2.3868 | |
| 57 | S | C | -2.0240 | |
| 58 | L | C | 0.0000 | |
| 59 | L | C | -2.3810 | |
| 60 | K | C | -2.9993 | |
| 61 | D | C | -2.6977 | |
| 62 | I | C | 0.0000 | |
| 63 | S | C | -2.0917 | |
| 64 | Q | C | -1.9990 | |
| 65 | K | C | -1.5130 | |
| 66 | V | C | 0.0000 | |
| 67 | A | C | -0.4003 | |
| 68 | V | C | 0.9012 | |
| 69 | Y | C | 0.6698 | |
| 70 | S | C | 0.3106 | |
| 71 | T | C | 0.8508 | |
| 72 | C | C | 1.4475 | |
| 73 | L | C | 1.7673 | |
| 1 | D | D | -1.5056 | |
| 2 | T | D | -0.4506 | |
| 3 | V | D | 0.5063 | |
| 4 | D | D | -0.9920 | |
| 5 | L | D | -1.3262 | |
| 6 | N | D | -2.2108 | |
| 7 | K | D | -2.1117 | |
| 8 | L | D | 0.0000 | |
| 9 | N | D | -3.0953 | |
| 10 | E | D | -3.3567 | |
| 11 | I | D | 0.0000 | |
| 12 | E | D | -2.4663 | |
| 13 | G | D | -2.1371 | |
| 14 | T | D | -2.2367 | |
| 15 | L | D | 0.0000 | |
| 16 | N | D | -2.6700 | |
| 17 | K | D | -3.5678 | |
| 18 | A | D | 0.0000 | |
| 19 | K | D | -2.8783 | |
| 20 | D | D | -3.4554 | |
| 21 | E | D | -2.8966 | |
| 22 | M | D | -2.4748 | |
| 23 | K | D | -2.9411 | |
| 24 | V | D | -0.5555 | |
| 25 | S | D | -1.6435 | |
| 26 | D | D | -3.0856 | |
| 27 | L | D | 0.0000 | |
| 28 | D | D | -3.9910 | |
| 29 | R | D | -4.1801 | |
| 30 | K | D | -3.7356 | |
| 31 | V | D | 0.0000 | |
| 32 | S | D | -3.1348 | |
| 33 | D | D | -4.2089 | |
| 34 | L | D | 0.0000 | |
| 35 | E | D | -3.7634 | |
| 36 | N | D | -3.8973 | |
| 37 | E | D | -3.9075 | |
| 38 | A | D | 0.0000 | |
| 39 | K | D | -4.0936 | |
| 40 | K | D | -3.6733 | |
| 41 | Q | D | -2.7869 | |
| 42 | E | D | -2.4734 | |
| 43 | A | D | -1.8355 | |
| 44 | A | D | -1.6424 | |
| 45 | I | D | 0.0000 | |
| 46 | M | D | -1.2338 | |
| 47 | D | D | -2.6195 | |
| 48 | Y | D | -2.0315 | |
| 49 | N | D | -2.3992 | |
| 50 | R | D | -3.6633 | |
| 51 | D | D | -3.2700 | |
| 52 | I | D | 0.0000 | |
| 53 | E | D | -3.8188 | |
| 54 | E | D | -3.6411 | |
| 55 | I | D | 0.0000 | |
| 56 | M | D | -2.1456 | |
| 57 | K | D | -2.9251 | |
| 58 | C | D | -2.3633 | |
| 59 | I | D | 0.0000 | |
| 60 | R | D | -2.8237 | |
| 61 | N | D | -2.6276 | |
| 62 | L | D | 0.0000 | |
| 63 | E | D | -2.8404 | |
| 64 | D | D | -3.2102 | |
| 65 | I | D | -2.0127 | |
| 66 | R | D | -2.6237 | |
| 67 | K | D | -2.7106 | |
| 68 | T | D | -1.2438 | |
| 69 | L | D | 0.0000 | |
| 70 | P | D | 0.0516 | |
| 71 | S | D | -0.2002 | |
| 72 | G | D | 0.3138 | |
| 73 | C | D | 1.4347 | |
| 74 | F | D | 1.7618 | |
| 75 | N | D | 0.1275 | |
| 76 | T | D | 0.3351 | |
| 77 | P | D | 0.1095 | |
| 78 | S | D | -0.3981 | |
| 79 | I | D | 0.3595 | |
| 80 | E | D | -1.8240 | |
| 81 | K | D | -2.1228 | |
| 82 | P | D | -1.3013 |