| Chain sequence(s) |
A: MIPIKRSSRRWKKKGRMRWKWYKKRLRRLKRERKRARS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:21)
[INFO] Main: Simulation completed successfully. (00:03:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 2.0261 | |
| 2 | I | A | 2.2874 | |
| 3 | P | A | 0.5018 | |
| 4 | I | A | -0.7150 | |
| 5 | K | A | -2.6615 | |
| 6 | R | A | -3.1892 | |
| 7 | S | A | -2.3331 | |
| 8 | S | A | -3.0236 | |
| 9 | R | A | -3.9444 | |
| 10 | R | A | -4.2364 | |
| 11 | W | A | -3.3718 | |
| 12 | K | A | -4.2637 | |
| 13 | K | A | -4.1368 | |
| 14 | K | A | -4.0783 | |
| 15 | G | A | -3.5184 | |
| 16 | R | A | -3.4498 | |
| 17 | M | A | -2.3525 | |
| 18 | R | A | -2.6979 | |
| 19 | W | A | -1.6802 | |
| 20 | K | A | -2.2807 | |
| 21 | W | A | -1.0630 | |
| 22 | Y | A | -1.1727 | |
| 23 | K | A | -2.6384 | |
| 24 | K | A | -3.5537 | |
| 25 | R | A | -3.7820 | |
| 26 | L | A | -3.4879 | |
| 27 | R | A | -5.1086 | |
| 28 | R | A | -5.6760 | |
| 29 | L | A | -4.7930 | |
| 30 | K | A | -5.8263 | |
| 31 | R | A | -6.5136 | |
| 32 | E | A | -6.0554 | |
| 33 | R | A | -5.8610 | |
| 34 | K | A | -5.8248 | |
| 35 | R | A | -5.1269 | |
| 36 | A | A | -3.8275 | |
| 37 | R | A | -3.9462 | |
| 38 | S | A | -2.3192 |