Chain sequence(s) |
A: AAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAY
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:30) [INFO] Main: Simulation completed successfully. (00:02:32) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | 0.9908 | |
2 | A | A | 1.1277 | |
3 | Y | A | 2.2989 | |
4 | V | A | 2.9492 | |
5 | Y | A | 2.3738 | |
6 | D | A | 0.5411 | |
7 | F | A | 1.8204 | |
8 | A | A | 1.2816 | |
9 | F | A | 1.4353 | |
10 | R | A | -1.1538 | |
11 | D | A | -1.1311 | |
12 | L | A | 0.4254 | |
13 | A | A | -0.2417 | |
14 | A | A | -0.1794 | |
15 | Y | A | 0.2414 | |
16 | R | A | -1.0161 | |
17 | F | A | 0.7116 | |
18 | H | A | -0.5335 | |
19 | N | A | -1.1737 | |
20 | I | A | 0.2735 | |
21 | A | A | 0.2011 | |
22 | G | A | -0.6322 | |
23 | H | A | -0.1455 | |
24 | Y | A | 1.0545 | |
25 | A | A | 0.7953 | |
26 | A | A | 1.0806 | |
27 | Y | A | 1.5257 | |
28 | C | A | 1.7115 | |
29 | Y | A | 2.1169 | |
30 | S | A | 1.3060 | |
31 | L | A | 1.6545 | |
32 | Y | A | 1.9807 | |
33 | G | A | 1.1954 | |
34 | T | A | 0.8063 | |
35 | T | A | 0.9825 | |
36 | L | A | 1.5288 | |
37 | A | A | 0.9523 | |
38 | A | A | 0.5450 | |
39 | Y | A | 1.0180 | |
40 | K | A | -0.2841 | |
41 | T | A | 0.6530 | |
42 | V | A | 1.9644 | |
43 | L | A | 1.5376 | |
44 | E | A | -0.3349 | |
45 | L | A | 1.4862 | |
46 | T | A | 0.8493 | |
47 | E | A | -0.2030 | |
48 | V | A | 1.2465 | |
49 | A | A | 0.2700 | |
50 | A | A | -0.2198 | |
51 | Y | A | 0.3202 | |
52 | A | A | -0.7720 | |
53 | E | A | -2.3793 | |
54 | K | A | -2.2385 | |
55 | L | A | -1.8148 | |
56 | R | A | -3.7538 | |
57 | H | A | -3.9192 | |
58 | L | A | -3.0835 | |
59 | N | A | -4.0689 | |
60 | E | A | -4.5451 | |
61 | K | A | -4.2370 | |
62 | R | A | -4.3518 | |
63 | R | A | -3.7666 | |
64 | F | A | -1.4736 | |
65 | H | A | -2.4337 | |
66 | N | A | -2.3535 | |
67 | G | A | -1.4679 | |
68 | P | A | -1.2408 | |
69 | G | A | -0.9487 | |
70 | P | A | -0.6514 | |
71 | G | A | -0.5789 | |
72 | L | A | -0.2182 | |
73 | D | A | -2.5091 | |
74 | K | A | -3.3749 | |
75 | K | A | -3.5754 | |
76 | Q | A | -3.1561 | |
77 | R | A | -2.2437 | |
78 | F | A | 0.0347 | |
79 | H | A | -0.9184 | |
80 | N | A | -0.9770 | |
81 | I | A | 0.1621 | |
82 | R | A | -1.7618 | |
83 | G | A | -1.5658 | |
84 | R | A | -1.7145 | |
85 | W | A | -0.1962 | |
86 | T | A | -0.3162 | |
87 | G | A | -0.6414 | |
88 | P | A | -0.7036 | |
89 | G | A | -1.1247 | |
90 | P | A | -1.1963 | |
91 | G | A | -1.4226 | |
92 | N | A | -2.1651 | |
93 | P | A | -1.6872 | |
94 | A | A | -1.6183 | |
95 | E | A | -2.7595 | |
96 | K | A | -2.4861 | |
97 | L | A | -0.7264 | |
98 | R | A | -2.2142 | |
99 | H | A | -1.5973 | |
100 | L | A | -0.9077 | |
101 | N | A | -2.4377 | |
102 | E | A | -3.5326 | |
103 | K | A | -3.7148 | |
104 | R | A | -3.4964 | |
105 | R | A | -2.5107 | |
106 | F | A | 0.0045 | |
107 | G | A | -0.5689 | |
108 | P | A | -0.6946 | |
109 | G | A | -0.9023 | |
110 | P | A | -1.3566 | |
111 | G | A | -1.1205 | |
112 | S | A | -0.9436 | |
113 | K | A | -1.3555 | |
114 | I | A | -0.0475 | |
115 | S | A | -1.0359 | |
116 | E | A | -2.0738 | |
117 | Y | A | -0.5898 | |
118 | R | A | -1.8513 | |
119 | H | A | -1.1384 | |
120 | Y | A | 1.0687 | |
121 | C | A | 1.7676 | |
122 | Y | A | 2.1987 | |
123 | S | A | 1.5870 | |
124 | L | A | 2.2799 | |
125 | Y | A | 1.5546 | |
126 | G | A | -0.0635 | |
127 | G | A | -1.0914 | |
128 | P | A | -0.9922 | |
129 | G | A | -1.2988 | |
130 | P | A | -1.0262 | |
131 | G | A | -0.9922 | |
132 | L | A | 0.0000 | |
133 | L | A | 0.5568 | |
134 | C | A | -0.4524 | |
135 | H | A | -2.0085 | |
136 | E | A | -2.6580 | |
137 | Q | A | -1.9725 | |
138 | L | A | -0.2804 | |
139 | S | A | -1.1204 | |
140 | D | A | -2.3707 | |
141 | S | A | -2.4583 | |
142 | E | A | -3.7937 | |
143 | E | A | -4.3807 | |
144 | E | A | -4.2163 | |
145 | N | A | -3.8336 | |
146 | D | A | -3.5000 | |
147 | G | A | -2.2290 | |
148 | P | A | -1.7427 | |
149 | G | A | -1.5816 | |
150 | P | A | -1.2897 | |
151 | G | A | -1.2205 | |
152 | Q | A | -0.7288 | |
153 | S | A | -0.0588 | |
154 | T | A | -0.4039 | |
155 | H | A | -1.0755 | |
156 | V | A | -0.3825 | |
157 | D | A | -1.5710 | |
158 | I | A | 0.8288 | |
159 | R | A | -1.0133 | |
160 | T | A | -0.7564 | |
161 | L | A | 0.4230 | |
162 | E | A | -1.4304 | |
163 | D | A | -1.0680 | |
164 | L | A | 1.4611 | |
165 | L | A | 2.0209 | |
166 | M | A | 1.6273 | |
167 | G | A | 0.3337 | |
168 | P | A | -0.6905 | |
169 | G | A | -1.0778 | |
170 | P | A | -1.0106 | |
171 | G | A | -1.0470 | |
172 | T | A | -0.6424 | |
173 | P | A | -0.2752 | |
174 | T | A | -0.0272 | |
175 | L | A | 0.6434 | |
176 | H | A | -0.8748 | |
177 | E | A | -1.0597 | |
178 | Y | A | 1.2319 | |
179 | M | A | 1.6814 | |
180 | L | A | 1.6220 | |
181 | D | A | -0.1809 | |
182 | L | A | 0.5352 | |
183 | Q | A | -1.2785 | |
184 | P | A | -1.6163 | |
185 | E | A | -2.2218 | |
186 | T | A | -1.5233 | |
187 | G | A | -1.2218 | |
188 | P | A | -0.8355 | |
189 | G | A | -0.7626 | |
190 | P | A | -0.5894 | |
191 | G | A | -0.3437 | |
192 | L | A | 0.4275 | |
193 | Q | A | -1.0202 | |
194 | D | A | -0.6209 | |
195 | I | A | 2.2355 | |
196 | V | A | 2.9153 | |
197 | L | A | 2.6184 | |
198 | H | A | 0.7247 | |
199 | L | A | 0.4928 | |
200 | E | A | -1.4933 | |
201 | P | A | -2.0318 | |
202 | Q | A | -2.5100 | |
203 | N | A | -2.3819 | |
204 | E | A | -1.8945 | |
205 | I | A | 0.4514 | |
206 | P | A | -0.2878 | |
207 | G | A | -0.5586 | |
208 | P | A | -0.6705 | |
209 | G | A | -0.8237 | |
210 | P | A | -0.7514 | |
211 | G | A | -0.5706 | |
212 | Y | A | -0.0574 | |
213 | R | A | -1.4346 | |
214 | A | A | -0.7969 | |
215 | H | A | -0.7484 | |
216 | Y | A | 0.9128 | |
217 | N | A | 0.7620 | |
218 | I | A | 2.7046 | |
219 | V | A | 2.9009 | |
220 | T | A | 2.1016 | |
221 | F | A | 2.3970 | |
222 | A | A | 1.9832 | |
223 | A | A | 1.6162 | |
224 | Y | A | 1.8537 | |
225 | T | A | 1.4769 | |
226 | L | A | 2.2873 | |
227 | Q | A | 0.8781 | |
228 | D | A | 0.4140 | |
229 | I | A | 2.7253 | |
230 | V | A | 3.0593 | |
231 | L | A | 2.2985 | |
232 | H | A | 1.5175 | |
233 | L | A | 2.9894 | |
234 | A | A | 2.6426 | |
235 | A | A | 2.5731 | |
236 | Y | A | 3.2789 | |
237 | L | A | 3.0379 | |
238 | L | A | 3.2242 | |
239 | M | A | 3.3403 | |
240 | G | A | 2.5246 | |
241 | T | A | 2.8723 | |
242 | L | A | 3.6664 | |
243 | G | A | 2.5934 | |
244 | I | A | 3.9486 | |
245 | V | A | 4.1121 | |
246 | A | A | 2.7211 | |
247 | A | A | 2.5263 | |
248 | Y | A | 3.2796 | |
249 | L | A | 2.5941 | |
250 | P | A | 0.2723 | |
251 | A | A | -0.8988 | |
252 | R | A | -2.8145 | |
253 | R | A | -3.3146 | |
254 | A | A | -2.5044 | |
255 | E | A | -3.0554 | |
256 | P | A | -1.9282 | |
257 | Q | A | -1.5959 | |
258 | A | A | -0.4802 | |
259 | A | A | 0.3623 | |
260 | Y | A | 1.2033 |