Project name: 4_i20e6_x11e6_x4e7_i14e7

Status: done

Started: 2025-08-11 18:56:14
Settings
Chain sequence(s) A: AAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:32)
Show buried residues

Minimal score value
-4.5451
Maximal score value
4.1121
Average score
-0.2833
Total score value
-73.6682

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.9908
2 A A 1.1277
3 Y A 2.2989
4 V A 2.9492
5 Y A 2.3738
6 D A 0.5411
7 F A 1.8204
8 A A 1.2816
9 F A 1.4353
10 R A -1.1538
11 D A -1.1311
12 L A 0.4254
13 A A -0.2417
14 A A -0.1794
15 Y A 0.2414
16 R A -1.0161
17 F A 0.7116
18 H A -0.5335
19 N A -1.1737
20 I A 0.2735
21 A A 0.2011
22 G A -0.6322
23 H A -0.1455
24 Y A 1.0545
25 A A 0.7953
26 A A 1.0806
27 Y A 1.5257
28 C A 1.7115
29 Y A 2.1169
30 S A 1.3060
31 L A 1.6545
32 Y A 1.9807
33 G A 1.1954
34 T A 0.8063
35 T A 0.9825
36 L A 1.5288
37 A A 0.9523
38 A A 0.5450
39 Y A 1.0180
40 K A -0.2841
41 T A 0.6530
42 V A 1.9644
43 L A 1.5376
44 E A -0.3349
45 L A 1.4862
46 T A 0.8493
47 E A -0.2030
48 V A 1.2465
49 A A 0.2700
50 A A -0.2198
51 Y A 0.3202
52 A A -0.7720
53 E A -2.3793
54 K A -2.2385
55 L A -1.8148
56 R A -3.7538
57 H A -3.9192
58 L A -3.0835
59 N A -4.0689
60 E A -4.5451
61 K A -4.2370
62 R A -4.3518
63 R A -3.7666
64 F A -1.4736
65 H A -2.4337
66 N A -2.3535
67 G A -1.4679
68 P A -1.2408
69 G A -0.9487
70 P A -0.6514
71 G A -0.5789
72 L A -0.2182
73 D A -2.5091
74 K A -3.3749
75 K A -3.5754
76 Q A -3.1561
77 R A -2.2437
78 F A 0.0347
79 H A -0.9184
80 N A -0.9770
81 I A 0.1621
82 R A -1.7618
83 G A -1.5658
84 R A -1.7145
85 W A -0.1962
86 T A -0.3162
87 G A -0.6414
88 P A -0.7036
89 G A -1.1247
90 P A -1.1963
91 G A -1.4226
92 N A -2.1651
93 P A -1.6872
94 A A -1.6183
95 E A -2.7595
96 K A -2.4861
97 L A -0.7264
98 R A -2.2142
99 H A -1.5973
100 L A -0.9077
101 N A -2.4377
102 E A -3.5326
103 K A -3.7148
104 R A -3.4964
105 R A -2.5107
106 F A 0.0045
107 G A -0.5689
108 P A -0.6946
109 G A -0.9023
110 P A -1.3566
111 G A -1.1205
112 S A -0.9436
113 K A -1.3555
114 I A -0.0475
115 S A -1.0359
116 E A -2.0738
117 Y A -0.5898
118 R A -1.8513
119 H A -1.1384
120 Y A 1.0687
121 C A 1.7676
122 Y A 2.1987
123 S A 1.5870
124 L A 2.2799
125 Y A 1.5546
126 G A -0.0635
127 G A -1.0914
128 P A -0.9922
129 G A -1.2988
130 P A -1.0262
131 G A -0.9922
132 L A 0.0000
133 L A 0.5568
134 C A -0.4524
135 H A -2.0085
136 E A -2.6580
137 Q A -1.9725
138 L A -0.2804
139 S A -1.1204
140 D A -2.3707
141 S A -2.4583
142 E A -3.7937
143 E A -4.3807
144 E A -4.2163
145 N A -3.8336
146 D A -3.5000
147 G A -2.2290
148 P A -1.7427
149 G A -1.5816
150 P A -1.2897
151 G A -1.2205
152 Q A -0.7288
153 S A -0.0588
154 T A -0.4039
155 H A -1.0755
156 V A -0.3825
157 D A -1.5710
158 I A 0.8288
159 R A -1.0133
160 T A -0.7564
161 L A 0.4230
162 E A -1.4304
163 D A -1.0680
164 L A 1.4611
165 L A 2.0209
166 M A 1.6273
167 G A 0.3337
168 P A -0.6905
169 G A -1.0778
170 P A -1.0106
171 G A -1.0470
172 T A -0.6424
173 P A -0.2752
174 T A -0.0272
175 L A 0.6434
176 H A -0.8748
177 E A -1.0597
178 Y A 1.2319
179 M A 1.6814
180 L A 1.6220
181 D A -0.1809
182 L A 0.5352
183 Q A -1.2785
184 P A -1.6163
185 E A -2.2218
186 T A -1.5233
187 G A -1.2218
188 P A -0.8355
189 G A -0.7626
190 P A -0.5894
191 G A -0.3437
192 L A 0.4275
193 Q A -1.0202
194 D A -0.6209
195 I A 2.2355
196 V A 2.9153
197 L A 2.6184
198 H A 0.7247
199 L A 0.4928
200 E A -1.4933
201 P A -2.0318
202 Q A -2.5100
203 N A -2.3819
204 E A -1.8945
205 I A 0.4514
206 P A -0.2878
207 G A -0.5586
208 P A -0.6705
209 G A -0.8237
210 P A -0.7514
211 G A -0.5706
212 Y A -0.0574
213 R A -1.4346
214 A A -0.7969
215 H A -0.7484
216 Y A 0.9128
217 N A 0.7620
218 I A 2.7046
219 V A 2.9009
220 T A 2.1016
221 F A 2.3970
222 A A 1.9832
223 A A 1.6162
224 Y A 1.8537
225 T A 1.4769
226 L A 2.2873
227 Q A 0.8781
228 D A 0.4140
229 I A 2.7253
230 V A 3.0593
231 L A 2.2985
232 H A 1.5175
233 L A 2.9894
234 A A 2.6426
235 A A 2.5731
236 Y A 3.2789
237 L A 3.0379
238 L A 3.2242
239 M A 3.3403
240 G A 2.5246
241 T A 2.8723
242 L A 3.6664
243 G A 2.5934
244 I A 3.9486
245 V A 4.1121
246 A A 2.7211
247 A A 2.5263
248 Y A 3.2796
249 L A 2.5941
250 P A 0.2723
251 A A -0.8988
252 R A -2.8145
253 R A -3.3146
254 A A -2.5044
255 E A -3.0554
256 P A -1.9282
257 Q A -1.5959
258 A A -0.4802
259 A A 0.3623
260 Y A 1.2033
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Laboratory of Theory of Biopolymers 2018