| Chain sequence(s) |
A: KKFGEAFKLADKDGSGEVTAEELRAALRESGAVSEVAADEIYEAARKLSPDGKISRAQFRVLTSPYRPSI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -3.0432 | |
| 2 | K | A | -3.3345 | |
| 3 | F | A | 0.0000 | |
| 4 | G | A | -3.0623 | |
| 5 | E | A | -3.4788 | |
| 6 | A | A | 0.0000 | |
| 7 | F | A | 0.0000 | |
| 8 | K | A | -3.3206 | |
| 9 | L | A | -1.9957 | |
| 10 | A | A | 0.0000 | |
| 11 | D | A | -3.1365 | |
| 12 | K | A | -3.3418 | |
| 13 | D | A | -3.3123 | |
| 14 | G | A | -2.4993 | |
| 15 | S | A | -2.1151 | |
| 16 | G | A | -2.3440 | |
| 17 | E | A | -3.0972 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -2.1760 | |
| 20 | A | A | 0.0000 | |
| 21 | E | A | -2.4048 | |
| 22 | E | A | -2.0635 | |
| 23 | L | A | 0.0000 | |
| 24 | R | A | -2.7753 | |
| 25 | A | A | -2.1424 | |
| 26 | A | A | 0.0000 | |
| 27 | L | A | 0.0000 | |
| 28 | R | A | -3.4877 | |
| 29 | E | A | -3.2484 | |
| 30 | S | A | -2.6426 | |
| 31 | G | A | -2.0213 | |
| 32 | A | A | -2.3093 | |
| 33 | V | A | -1.3535 | |
| 34 | S | A | -0.9258 | |
| 35 | E | A | -2.4971 | |
| 36 | V | A | -0.2050 | |
| 37 | A | A | 0.0000 | |
| 38 | A | A | 0.0000 | |
| 39 | D | A | -2.9932 | |
| 40 | E | A | -2.6558 | |
| 41 | I | A | 0.0000 | |
| 42 | Y | A | -2.3858 | |
| 43 | E | A | -3.0063 | |
| 44 | A | A | -1.6936 | |
| 45 | A | A | 0.0000 | |
| 46 | R | A | -2.5305 | |
| 47 | K | A | -1.9391 | |
| 48 | L | A | -0.2544 | |
| 49 | S | A | -1.3633 | |
| 50 | P | A | -1.9064 | |
| 51 | D | A | -2.6648 | |
| 52 | G | A | 0.0000 | |
| 53 | K | A | -2.8801 | |
| 54 | I | A | 0.0000 | |
| 55 | S | A | -2.2495 | |
| 56 | R | A | -2.9459 | |
| 57 | A | A | -1.4184 | |
| 58 | Q | A | -1.1755 | |
| 59 | F | A | 0.0000 | |
| 60 | R | A | -1.6383 | |
| 61 | V | A | 0.4421 | |
| 62 | L | A | 0.0000 | |
| 63 | T | A | 0.0000 | |
| 64 | S | A | -0.2661 | |
| 65 | P | A | -0.2008 | |
| 66 | Y | A | -0.0294 | |
| 67 | R | A | -1.0085 | |
| 68 | P | A | -0.3639 | |
| 69 | S | A | 0.5749 | |
| 70 | I | A | 1.7783 |