| Chain sequence(s) |
A: DTLCGSCGGNYTNDEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPSCCT
P: ARTKQTA input PDB |
| Selected Chain(s) | A,P |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:57)
[INFO] Main: Simulation completed successfully. (00:01:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 4 | D | A | -1.6270 | |
| 5 | T | A | -0.6379 | |
| 6 | L | A | 0.3918 | |
| 7 | C | A | 0.0000 | |
| 8 | G | A | -0.7670 | |
| 9 | S | A | -0.3484 | |
| 10 | C | A | 0.4633 | |
| 11 | G | A | 0.1070 | |
| 12 | G | A | -0.2704 | |
| 13 | N | A | -0.9872 | |
| 14 | Y | A | -0.9909 | |
| 15 | T | A | -1.5957 | |
| 16 | N | A | -2.6707 | |
| 17 | D | A | -2.7988 | |
| 18 | E | A | -2.2720 | |
| 19 | F | A | 0.0000 | |
| 20 | W | A | 0.0000 | |
| 21 | I | A | 0.0000 | |
| 22 | C | A | 0.0000 | |
| 23 | C | A | 0.0000 | |
| 24 | D | A | -1.6400 | |
| 25 | V | A | 0.3634 | |
| 26 | C | A | -0.7301 | |
| 27 | E | A | -2.6232 | |
| 28 | R | A | -2.3414 | |
| 29 | W | A | -1.2756 | |
| 30 | Y | A | 0.0000 | |
| 31 | H | A | 0.0000 | |
| 32 | G | A | 0.0000 | |
| 33 | K | A | -2.3541 | |
| 34 | C | A | -1.2100 | |
| 35 | V | A | 0.0000 | |
| 36 | K | A | -2.5094 | |
| 37 | I | A | 0.0000 | |
| 38 | T | A | -1.6150 | |
| 39 | P | A | -1.5321 | |
| 40 | A | A | -1.3339 | |
| 41 | K | A | -2.2443 | |
| 42 | A | A | 0.0000 | |
| 43 | E | A | -2.7799 | |
| 44 | S | A | -1.8898 | |
| 45 | I | A | -2.1607 | |
| 46 | K | A | -2.9191 | |
| 47 | Q | A | -2.3925 | |
| 48 | Y | A | 0.0000 | |
| 49 | K | A | -1.5178 | |
| 50 | C | A | 0.0000 | |
| 51 | P | A | -0.5738 | |
| 52 | S | A | -0.3224 | |
| 53 | C | A | 0.2502 | |
| 54 | C | A | 0.4649 | |
| 55 | T | A | 0.0720 | |
| 1 | A | P | -2.3111 | |
| 2 | R | P | -2.8910 | |
| 3 | T | P | -1.7728 | |
| 4 | K | P | -2.1103 | |
| 5 | Q | P | -2.3776 | |
| 6 | T | P | -1.9381 | |
| 7 | A | P | -1.3049 |