Project name: 2d03_L178S

Status: done

Started: 2026-04-21 06:45:42
Settings
Chain sequence(s) A: EVQLLESGGGLVQPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVSSISVGGHRTYYADSVKGRSTISRDNSKNTLYLQMNSLRAEDTAVYYCARIRVGPSGGAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVSQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEGGGSGGGSSRGQYSREDNNCTHFPVGQSHMLLELRTAFSQVKTFFQTKDQLDNILLTDSLMQDFKGYLGCQALSEMIQFYLVEVMPQAEKHGPEIKEHLNSLGEKLKTLRMRLRRCHRFLPCENKSKAVEQVKSDFNKLQDQGVYKAMNEFDIFINCIEAYMMIKMKSHHHHHH
B: SELTQDPAVSVALGQTVRITCSGSNTNIGKNYVSWYQQKPGQAPVLVIYANSNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCASWDASLNGWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:08:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:08:37)
Show buried residues

Minimal score value
-3.7034
Maximal score value
1.2373
Average score
-0.754
Total score value
-459.1971

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -1.9933
2 V A -0.9974
3 Q A -0.9192
4 L A 0.0000
5 L A 0.5003
6 E A 0.0000
7 S A -0.3340
8 G A -0.7570
9 G A 0.0000
10 G A -0.4660
11 L A -0.1362
12 V A 0.0000
13 Q A -1.6917
14 P A -1.7961
15 G A -1.5209
16 G A -1.1737
17 S A -1.3133
18 L A -1.0383
19 R A -1.8310
20 L A 0.0000
21 S A -0.3540
22 C A 0.0000
23 A A -0.2126
24 A A 0.0000
25 S A -0.6790
26 G A -1.1234
27 F A -0.6551
28 T A -0.5783
29 F A 0.0000
30 S A -1.2499
31 N A -1.0828
32 A A 0.0000
33 W A -0.0334
34 M A 0.0000
35 S A 0.0000
36 W A 0.0000
37 V A 0.0000
38 R A 0.0000
39 Q A -0.7697
40 A A -1.1855
41 P A -0.9717
42 G A -1.4662
43 K A -2.2543
44 G A -1.3973
45 L A 0.0000
46 E A -0.9513
47 W A 0.0000
48 V A 0.0000
49 S A 0.0000
50 S A 0.0000
51 I A 0.0000
52 S A 0.0000
53 V A -0.6552
54 G A -1.2748
55 G A -1.3833
56 H A -1.8654
57 R A -1.9762
58 T A -0.8980
59 Y A -0.7116
60 Y A -0.9103
61 A A -1.4574
62 D A -2.4770
63 S A -1.7741
64 V A 0.0000
65 K A -2.5911
66 G A -1.7816
67 R A -1.5138
68 S A 0.0000
69 T A -0.8009
70 I A 0.0000
71 S A -0.7287
72 R A -0.9972
73 D A -1.6835
74 N A -1.8885
75 S A -1.6318
76 K A -2.3902
77 N A -1.7267
78 T A 0.0000
79 L A 0.0000
80 Y A -0.4684
81 L A 0.0000
82 Q A -1.1896
83 M A 0.0000
84 N A -1.5105
85 S A -1.3394
86 L A 0.0000
87 R A -2.3695
88 A A -1.7647
89 E A -2.2440
90 D A 0.0000
91 T A -0.7563
92 A A 0.0000
93 V A 0.2207
94 Y A 0.0000
95 Y A 0.0000
96 C A 0.0000
97 A A 0.0000
98 R A -0.0296
99 I A 0.0000
100 R A 0.0691
101 V A 1.0360
102 G A 0.3835
103 P A -0.0071
104 S A -0.2534
105 G A -0.0384
106 G A 0.3522
107 A A 0.0000
108 F A 0.0000
109 D A 0.3384
110 Y A 0.5093
111 W A 0.2827
112 G A 0.0000
113 Q A -1.1514
114 G A 0.0000
115 T A -0.0198
116 L A 0.0590
117 V A 0.0000
118 T A -0.4702
119 V A 0.0000
120 S A -0.9885
121 S A -0.7373
122 A A -0.4884
123 S A -0.6156
124 T A -0.7240
125 K A -1.1450
126 G A -1.3418
127 P A 0.0000
128 S A -0.2846
129 V A 0.0000
130 F A 0.0000
131 P A -1.0123
132 L A 0.0000
133 A A -0.7914
134 P A 0.0000
135 S A 0.0000
136 S A 0.0000
137 K A 0.0000
138 S A 0.0000
139 T A 0.0000
140 S A -0.3465
141 G A 0.0000
142 G A 0.0000
143 T A 0.0000
144 A A 0.0000
145 A A 0.0038
146 L A 0.0000
147 G A 0.0000
148 C A 0.0000
149 L A 0.0000
150 V A 0.0000
151 K A -0.3126
152 D A -0.6401
153 Y A 0.0000
154 F A 0.0000
155 P A 0.0000
156 E A -0.6212
157 P A -0.7022
158 V A -0.6571
159 T A -0.6096
160 V A -0.3444
161 S A -0.3918
162 W A 0.0000
163 N A -0.7408
164 S A -0.6559
165 G A -0.4573
166 A A -0.2145
167 L A 0.0247
168 T A -0.1991
169 S A -0.2792
170 G A -0.3469
171 V A 0.1267
172 H A -0.1798
173 T A -0.0411
174 F A 0.0000
175 P A -0.4495
176 A A -0.2784
177 V A 0.0000
178 S A -0.4679
179 Q A -0.5650
180 S A -0.5440
181 S A -0.5319
182 G A -0.5362
183 L A -0.4125
184 Y A -0.2631
185 S A 0.0000
186 L A 0.0000
187 S A 0.0000
188 S A 0.0000
189 V A 0.1529
190 V A 0.0000
191 T A -0.1588
192 V A 0.0000
193 P A -0.7846
194 S A 0.0000
195 S A -0.8690
196 S A -0.7443
197 L A -1.0587
198 G A -1.1543
199 T A -0.7591
200 Q A -1.2912
201 T A -1.1650
202 Y A 0.0000
203 I A -1.2044
204 C A 0.0000
205 N A -1.4694
206 V A 0.0000
207 N A -1.9689
208 H A 0.0000
209 K A -2.7595
210 P A -1.5167
211 S A -1.7897
212 N A -2.5932
213 T A -2.0719
214 K A -2.6949
215 V A -1.5917
216 D A -2.4757
217 K A -2.0353
218 K A -2.4218
219 V A 0.0000
220 E A -2.5716
221 G A -1.6193
222 G A -1.0735
223 G A -0.9305
224 S A 0.0000
225 G A -0.6617
226 G A 0.0000
227 G A 0.0000
228 S A -1.3906
229 S A -1.5882
230 R A -2.2684
231 G A -1.6999
232 Q A -1.9101
233 Y A -1.4527
234 S A -1.9946
235 R A -3.3102
236 E A -3.4380
237 D A -3.6199
238 N A -2.9514
239 N A -2.4098
240 C A -1.3000
241 T A -0.6449
242 H A -1.0481
243 F A 0.0000
244 P A 0.6381
245 V A 1.2373
246 G A 0.0000
247 Q A 0.0000
248 S A 0.5733
249 H A 0.0716
250 M A 0.0000
251 L A 0.0000
252 L A 1.1633
253 E A 0.0000
254 L A 0.0000
255 R A -0.4173
256 T A -0.1656
257 A A 0.0000
258 F A 0.0000
259 S A -0.9211
260 Q A -0.9256
261 V A 0.0000
262 K A -1.2576
263 T A -0.8757
264 F A -0.4042
265 F A 0.0000
266 Q A -1.8077
267 T A -1.2694
268 K A -1.5100
269 D A -1.9486
270 Q A -2.1850
271 L A -1.4469
272 D A -2.1738
273 N A -1.4446
274 I A 0.3278
275 L A 0.0000
276 L A 0.0000
277 T A -0.8580
278 D A -1.9350
279 S A -1.7764
280 L A 0.0000
281 M A -1.6658
282 Q A -2.1517
283 D A -1.4876
284 F A 0.0000
285 K A -1.4223
286 G A -0.5783
287 Y A 0.7548
288 L A -0.4546
289 G A 0.0000
290 C A 0.0000
291 Q A -1.5035
292 A A 0.0000
293 L A 0.0000
294 S A -0.8078
295 E A -1.5026
296 M A 0.0000
297 I A 0.0000
298 Q A -0.4036
299 F A 0.0000
300 Y A 0.0000
301 L A -0.1417
302 V A -0.2133
303 E A -1.0455
304 V A 0.0000
305 M A 0.0000
306 P A 0.0000
307 Q A -1.3977
308 A A 0.0000
309 E A 0.0000
310 K A -2.1780
311 H A -1.4865
312 G A -1.7455
313 P A -1.8123
314 E A -2.0117
315 I A 0.0000
316 K A 0.0000
317 E A -0.6744
318 H A -0.7009
319 L A 0.0000
320 N A 0.0000
321 S A 0.0000
322 L A 0.0000
323 G A -0.0899
324 E A 0.0000
325 K A 0.0000
326 L A 0.0000
327 K A -0.2095
328 T A 0.0000
329 L A 0.0000
330 R A 0.0000
331 M A -0.6015
332 R A -1.4099
333 L A 0.0000
334 R A -1.8286
335 R A -2.7511
336 C A 0.0000
337 H A -2.2418
338 R A -1.9181
339 F A 0.0000
340 L A 0.0000
341 P A -1.6543
342 C A -1.6056
343 E A -2.8795
344 N A -3.2118
345 K A -3.5157
346 S A 0.0000
347 K A -3.2987
348 A A -2.4406
349 V A 0.0000
350 E A -3.7034
351 Q A -3.0870
352 V A 0.0000
353 K A -2.8260
354 S A -2.4261
355 D A -2.2600
356 F A 0.0000
357 N A -3.3018
358 K A -3.1764
359 L A -2.2634
360 Q A -3.1217
361 D A -3.0012
362 Q A -2.3737
363 G A 0.0000
364 V A 0.0000
365 Y A -1.2226
366 K A 0.0000
367 A A 0.0000
368 M A 0.0000
369 N A -0.6659
370 E A 0.0000
371 F A 0.0000
372 D A -0.6734
373 I A -0.0969
374 F A 0.0000
375 I A 0.0000
376 N A -1.1006
377 C A 0.0000
378 I A 0.0000
379 E A -0.5938
380 A A 0.0000
381 Y A 0.0000
382 M A 0.0000
383 M A 0.0586
384 I A -0.2147
385 K A -0.9023
386 M A -0.9999
387 K A -2.1428
388 S A -2.0439
389 H A -2.3215
390 H A -3.0153
391 H A -3.1809
392 H A -2.8907
393 H A -2.6515
394 H A -2.4783
1 S B -1.0704
2 E B -1.8367
3 L B 0.0000
4 T B -1.1767
5 Q B -1.2479
6 D B -2.2281
7 P B -1.5991
8 A B -1.1219
9 V B -0.7062
10 S B -0.1172
11 V B 0.0000
12 A B -0.1563
13 L B -0.2348
14 G B -1.0319
15 Q B -1.3684
16 T B -1.3017
17 V B 0.0000
18 R B -1.8584
19 I B 0.0000
20 T B -0.9750
21 C B 0.0000
22 S B -0.9533
23 G B -1.2517
24 S B -1.6384
25 N B -2.1952
26 T B -1.5693
27 N B 0.0000
28 I B 0.0000
29 G B -2.0316
30 K B -2.2821
31 N B -1.0824
32 Y B -0.0341
33 V B 0.0000
34 S B 0.0000
35 W B 0.0000
36 Y B 0.0000
37 Q B -0.1174
38 Q B -0.5974
39 K B -1.3130
40 P B -1.0797
41 G B -1.3657
42 Q B -1.4561
43 A B -0.6110
44 P B 0.0000
45 V B 1.1763
46 L B 0.0000
47 V B 0.0000
48 I B 0.0000
49 Y B -0.5676
50 A B -0.4994
51 N B -0.6071
52 S B -1.0356
53 N B -1.5951
54 R B -1.8837
55 P B -0.9333
56 S B -0.9002
57 G B -0.8342
58 I B -0.7545
59 P B -1.2529
60 D B -2.2045
61 R B -1.4756
62 F B 0.0000
63 S B -1.2953
64 G B -0.9401
65 S B -0.6267
66 S B -0.5615
67 S B -0.7212
68 G B -1.3474
69 N B -1.4883
70 T B -0.7743
71 A B 0.0000
72 S B -0.7550
73 L B 0.0000
74 T B -1.0145
75 I B 0.0000
76 T B -1.2888
77 G B -1.0536
78 A B 0.0000
79 Q B -1.4223
80 A B -1.1914
81 E B -2.1042
82 D B 0.0000
83 E B 0.0000
84 A B 0.0000
85 D B 0.0000
86 Y B 0.0000
87 Y B 0.0000
88 C B 0.0000
89 A B 0.0000
90 S B 0.0000
91 W B -0.3222
92 D B 0.0000
93 A B -0.6501
94 S B -0.2743
95 L B -0.2536
96 N B -0.9698
97 G B 0.0000
98 W B 0.0000
99 V B 0.0000
100 F B -0.4757
101 G B 0.0000
102 G B -1.6219
103 G B 0.0000
104 T B 0.0000
105 K B -2.0408
106 L B 0.0000
107 T B -0.1259
108 V B 0.0000
109 L B 0.4624
110 G B -0.2513
111 Q B -0.6407
112 P B -1.2099
113 K B -2.3273
114 A B -1.4581
115 N B -1.1232
116 P B 0.0000
117 T B -0.3117
118 V B 0.0000
119 T B -0.0310
120 L B 0.0000
121 F B 0.0000
122 P B -0.0388
123 P B 0.0000
124 S B 0.0000
125 S B -1.5926
126 E B -2.5633
127 E B 0.0000
128 L B -2.1876
129 Q B -2.3849
130 A B -1.9226
131 N B -2.5806
132 K B -2.3165
133 A B 0.0000
134 T B 0.0000
135 L B 0.0000
136 V B 0.0000
137 C B 0.0000
138 L B 0.0000
139 I B 0.0000
140 S B -0.5887
141 D B -1.3823
142 F B 0.0000
143 Y B -1.1594
144 P B -0.9678
145 G B -0.8400
146 A B -0.4405
147 V B -0.3045
148 T B -0.2734
149 V B 0.2086
150 A B -0.2782
151 W B 0.0000
152 K B -1.0279
153 A B 0.0000
154 D B -1.8250
155 G B -1.4945
156 S B -0.9091
157 P B -0.9193
158 V B -0.8830
159 K B -1.6622
160 A B -0.7965
161 G B -0.6077
162 V B -0.4602
163 E B -0.5907
164 T B -0.5750
165 T B -1.0093
166 K B -1.7460
167 P B -0.9662
168 S B -0.8679
169 K B -1.1203
170 Q B -1.1384
171 S B -1.4357
172 N B -1.6621
173 N B -1.4731
174 K B -1.4535
175 Y B -0.8430
176 A B 0.0000
177 A B 0.0000
178 S B 0.0000
179 S B 0.0000
180 Y B 0.0000
181 L B 0.0000
182 S B -0.4364
183 L B -1.0170
184 T B -1.7391
185 P B -2.4237
186 E B -3.1415
187 Q B -2.3520
188 W B 0.0000
189 K B -3.1151
190 S B -2.4571
191 H B -2.4804
192 R B -2.6557
193 S B -1.9106
194 Y B 0.0000
195 S B -0.6474
196 C B 0.0000
197 Q B -0.1925
198 V B 0.0000
199 T B -0.4591
200 H B 0.0000
201 E B -2.2800
202 G B -1.3305
203 S B -0.8584
204 T B -0.4542
205 V B 0.0088
206 E B -0.3397
207 K B 0.0000
208 T B 0.0000
209 V B 0.0000
210 A B 0.0000
211 P B -1.0505
212 T B -0.8636
213 E B -0.3322
214 C B 0.1708
215 S B -0.3169
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Laboratory of Theory of Biopolymers 2018