| Chain sequence(s) |
B: SAEEEAEKSRGGGGGVGGGGGGGGGLGGGGGGGGGGGAGG
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:06)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:06)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:06)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:06)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:06)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.8900 | |
| 2 | A | B | -2.3064 | |
| 3 | E | B | -3.8720 | |
| 4 | E | B | -4.1945 | |
| 5 | E | B | -4.0370 | |
| 6 | A | B | -3.6684 | |
| 7 | E | B | -4.5606 | |
| 8 | K | B | -4.0780 | |
| 9 | S | B | -2.8610 | |
| 10 | R | B | -3.3797 | |
| 11 | G | B | -2.7920 | |
| 12 | G | B | -1.9057 | |
| 13 | G | B | -1.7747 | |
| 14 | G | B | -1.3044 | |
| 15 | G | B | -0.5210 | |
| 16 | V | B | 0.8281 | |
| 17 | G | B | -0.5585 | |
| 18 | G | B | -2.0633 | |
| 19 | G | B | -1.8981 | |
| 20 | G | B | -2.2904 | |
| 21 | G | B | -2.2553 | |
| 22 | G | B | -1.4873 | |
| 23 | G | B | -1.0772 | |
| 24 | G | B | -0.7972 | |
| 25 | G | B | -0.3257 | |
| 26 | L | B | 0.6834 | |
| 27 | G | B | -0.3502 | |
| 28 | G | B | -0.7625 | |
| 29 | G | B | -1.0169 | |
| 30 | G | B | -1.2929 | |
| 31 | G | B | -1.3331 | |
| 32 | G | B | -1.3015 | |
| 33 | G | B | -1.3034 | |
| 34 | G | B | -1.3608 | |
| 35 | G | B | -1.2403 | |
| 36 | G | B | -1.2692 | |
| 37 | G | B | -1.1494 | |
| 38 | A | B | -0.6261 | |
| 39 | G | B | -0.6695 | |
| 40 | G | B | -0.5065 |