| Chain sequence(s) |
L: KWFIPNGVLAETYLKD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 287 | K | L | -1.7153 | |
| 288 | W | L | 1.1296 | |
| 289 | F | L | 1.9743 | |
| 290 | I | L | 2.2569 | |
| 291 | P | L | 0.0703 | |
| 292 | N | L | -1.3687 | |
| 293 | G | L | -0.3715 | |
| 294 | V | L | 1.7747 | |
| 295 | L | L | 1.8699 | |
| 296 | A | L | -0.0377 | |
| 297 | E | L | -1.6440 | |
| 298 | T | L | -0.1543 | |
| 299 | Y | L | 1.5671 | |
| 300 | L | L | 1.3897 | |
| 301 | K | L | -1.7476 | |
| 302 | D | L | -2.3174 |