Project name: 296

Status: done

Started: 2025-06-25 13:27:55
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Chain sequence(s) H: EVQLVESGGGLVQAGGSLRLSCAASGRTFSGYDMGWFRQAPGKEREFVAQISRHNSNTYYADAVKGRFTISRDNAKNTVSLQMNSLKPEDTAVYYCAIGSLFPSSRERDYDYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:00)
Show buried residues

Minimal score value
-3.111
Maximal score value
2.267
Average score
-0.7668
Total score value
-94.3105

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.6996
2 V H 0.0000
3 Q H -1.7057
4 L H 0.0000
5 V H 0.6907
6 E H 0.0000
7 S H -0.6007
8 G H -1.0759
9 G H -0.5660
11 G H 0.2510
12 L H 1.1439
13 V H 0.0581
14 Q H -1.2255
15 A H -1.4192
16 G H -1.3033
17 G H -0.8711
18 S H -1.0596
19 L H -0.6696
20 R H -1.6667
21 L H 0.0000
22 S H -0.3938
23 C H 0.0000
24 A H -0.1764
25 A H 0.0000
26 S H -1.2841
27 G H -1.9732
28 R H -2.3108
29 T H -1.3412
30 F H 0.0000
35 S H -1.2540
36 G H -0.5971
37 Y H 0.0000
38 D H 0.0000
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.6332
45 A H -1.6416
46 P H -1.1940
47 G H -1.7308
48 K H -2.9296
49 E H -3.1110
50 R H -2.1248
51 E H -1.7543
52 F H -0.6904
53 V H 0.0000
54 A H 0.0000
55 Q H 0.0000
56 I H 0.0000
57 S H 0.0000
58 R H -1.1345
59 H H -1.9532
62 N H -1.8271
63 S H -1.4364
64 N H -1.6023
65 T H -0.3968
66 Y H 0.4096
67 Y H -0.1984
68 A H -0.8741
69 D H -2.0067
70 A H -1.3192
71 V H 0.0000
72 K H -1.6480
74 G H -1.3626
75 R H -1.2317
76 F H 0.0000
77 T H -0.5316
78 I H 0.0000
79 S H -0.6570
80 R H 0.0000
81 D H -2.0287
82 N H -2.5053
83 A H -1.7050
84 K H -2.4691
85 N H -2.0935
86 T H -1.1118
87 V H 0.0000
88 S H 0.0000
89 L H 0.0000
90 Q H -0.9648
91 M H 0.0000
92 N H -1.2598
93 S H -1.1692
94 L H 0.0000
95 K H -2.2502
96 P H -1.8148
97 E H -2.2715
98 D H 0.0000
99 T H -0.7663
100 A H 0.0000
101 V H -0.2211
102 Y H 0.0000
103 Y H -0.0847
104 C H 0.0000
105 A H 0.0000
106 I H 0.0000
107 G H 0.0000
108 S H 0.1393
109 L H 1.8621
110 F H 2.2670
111 P H 0.6641
111A S H -0.4198
112B S H -1.2079
112A R H -2.9214
112 E H -2.7063
113 R H -3.1037
114 D H -1.9651
115 Y H 0.0000
116 D H -1.8438
117 Y H -0.8790
118 W H -0.2273
119 G H -0.2388
120 Q H -1.0008
121 G H -0.4587
122 T H -0.5242
123 Q H -0.6364
124 V H 0.0000
125 T H -0.1612
126 V H 0.0000
127 S H -0.7767
128 S H -0.8266
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Laboratory of Theory of Biopolymers 2018