| Chain sequence(s) |
A: QLQLVESGGGLVQAGGSLRLSCAASGSTLSIHSFGWYRQAPGKQREAVATITNGGAPTYTDSVKGRFNIFRDYRENTAYLQMNTLKPEDTAVYYCRVLFGVDGRAWGQGTQVTISS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:18)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.5211 | |
| 2 | L | A | -1.2400 | |
| 3 | Q | A | -1.3801 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.5657 | |
| 6 | E | A | -0.1989 | |
| 7 | S | A | -0.6076 | |
| 8 | G | A | -0.9893 | |
| 9 | G | A | -0.7704 | |
| 10 | G | A | -0.0122 | |
| 11 | L | A | 1.1088 | |
| 12 | V | A | 0.1230 | |
| 13 | Q | A | -1.1591 | |
| 14 | A | A | -1.3562 | |
| 15 | G | A | -1.2451 | |
| 16 | G | A | -0.9880 | |
| 17 | S | A | -1.1176 | |
| 18 | L | A | -0.9425 | |
| 19 | R | A | -2.0555 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.2286 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.3275 | |
| 24 | A | A | -0.5478 | |
| 25 | S | A | -1.0147 | |
| 26 | G | A | -1.1180 | |
| 27 | S | A | -0.6531 | |
| 28 | T | A | -0.1743 | |
| 29 | L | A | 0.8874 | |
| 30 | S | A | 0.2785 | |
| 31 | I | A | 0.0000 | |
| 32 | H | A | -0.3050 | |
| 33 | S | A | -0.7167 | |
| 34 | F | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.9155 | |
| 38 | R | A | -1.5556 | |
| 39 | Q | A | -2.1819 | |
| 40 | A | A | -2.0131 | |
| 41 | P | A | -1.3054 | |
| 42 | G | A | -1.8085 | |
| 43 | K | A | -3.1701 | |
| 44 | Q | A | -3.1241 | |
| 45 | R | A | -2.7650 | |
| 46 | E | A | -2.8117 | |
| 47 | A | A | -1.2386 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | T | A | 0.1263 | |
| 51 | I | A | -0.0029 | |
| 52 | T | A | -0.6847 | |
| 53 | N | A | -1.5882 | |
| 54 | G | A | -1.2183 | |
| 55 | G | A | -0.8160 | |
| 56 | A | A | -0.1275 | |
| 57 | P | A | -0.0203 | |
| 58 | T | A | -0.4959 | |
| 59 | Y | A | -1.0122 | |
| 60 | T | A | -1.6159 | |
| 61 | D | A | -2.4918 | |
| 62 | S | A | -1.8108 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.7152 | |
| 65 | G | A | -1.8305 | |
| 66 | R | A | -1.4898 | |
| 67 | F | A | 0.0000 | |
| 68 | N | A | -0.7635 | |
| 69 | I | A | 0.0000 | |
| 70 | F | A | 1.7639 | |
| 71 | R | A | 0.2173 | |
| 72 | D | A | -0.4859 | |
| 73 | Y | A | -0.4054 | |
| 74 | R | A | -2.2811 | |
| 75 | E | A | -2.5687 | |
| 76 | N | A | -1.4049 | |
| 77 | T | A | 0.0000 | |
| 78 | A | A | 0.0000 | |
| 79 | Y | A | 0.1523 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -0.9159 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.2780 | |
| 84 | T | A | -1.0277 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.1012 | |
| 87 | P | A | -1.7411 | |
| 88 | E | A | -2.2309 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.8511 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.4467 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.5812 | |
| 95 | C | A | 0.0000 | |
| 96 | R | A | -0.8020 | |
| 97 | V | A | 0.0000 | |
| 98 | L | A | -0.1778 | |
| 99 | F | A | 0.0321 | |
| 100 | G | A | 0.3613 | |
| 101 | V | A | 0.8252 | |
| 102 | D | A | -1.2446 | |
| 103 | G | A | -1.0356 | |
| 104 | R | A | -1.7957 | |
| 105 | A | A | -1.0210 | |
| 106 | W | A | -0.3429 | |
| 107 | G | A | -0.4447 | |
| 108 | Q | A | -1.1684 | |
| 109 | G | A | -0.7266 | |
| 110 | T | A | -0.8143 | |
| 111 | Q | A | -1.1407 | |
| 112 | V | A | 0.0000 | |
| 113 | T | A | -0.1754 | |
| 114 | I | A | 0.0000 | |
| 115 | S | A | -0.6547 | |
| 116 | S | A | -0.7816 |