| Chain sequence(s) |
H: GQIQLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYVDDFKGRFAFSLETSASTAYLEINNLKNEDTATYFCTRGDYVNWYFDVWGAGTTVTVS
L: GDVVMTQIPLSLPVSLGEQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRFYGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:28)
[INFO] Main: Simulation completed successfully. (00:04:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | G | H | -1.0577 | |
| 4 | Q | H | -1.3090 | |
| 5 | I | H | -0.2865 | |
| 6 | Q | H | -0.5307 | |
| 7 | L | H | 0.2293 | |
| 8 | V | H | 1.1209 | |
| 9 | Q | H | 0.2947 | |
| 10 | S | H | -0.5650 | |
| 11 | G | H | -0.6722 | |
| 12 | P | H | -0.5220 | |
| 13 | E | H | -0.4019 | |
| 14 | L | H | 0.6615 | |
| 15 | K | H | -1.0358 | |
| 16 | K | H | -2.4233 | |
| 17 | P | H | -2.4488 | |
| 18 | G | H | -2.2273 | |
| 19 | E | H | -2.0331 | |
| 20 | T | H | -1.8410 | |
| 21 | V | H | 0.0000 | |
| 22 | K | H | -2.1390 | |
| 23 | I | H | 0.0000 | |
| 24 | S | H | -0.5315 | |
| 25 | C | H | 0.0000 | |
| 26 | K | H | -0.6437 | |
| 27 | A | H | -0.1955 | |
| 28 | S | H | -0.4643 | |
| 29 | G | H | -0.6169 | |
| 30 | Y | H | -0.1350 | |
| 31 | A | H | -0.1382 | |
| 32 | F | H | -0.1309 | |
| 33 | T | H | -0.1761 | |
| 34 | N | H | -0.7494 | |
| 35 | Y | H | 0.1469 | |
| 36 | G | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | N | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | V | H | 0.0000 | |
| 41 | K | H | -1.1609 | |
| 42 | E | H | -1.7591 | |
| 43 | A | H | -1.8626 | |
| 44 | P | H | -1.4260 | |
| 45 | G | H | -1.9166 | |
| 46 | K | H | -3.2166 | |
| 47 | E | H | -3.2799 | |
| 48 | L | H | 0.0000 | |
| 49 | K | H | -1.6061 | |
| 50 | W | H | -0.4773 | |
| 51 | M | H | 0.0000 | |
| 52 | G | H | 0.0000 | |
| 53 | W | H | 0.0377 | |
| 54 | I | H | 0.0000 | |
| 55 | N | H | -0.3839 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | 0.7399 | |
| 58 | T | H | -0.1433 | |
| 59 | G | H | -0.8490 | |
| 60 | E | H | -1.7815 | |
| 61 | P | H | -0.9657 | |
| 62 | T | H | -0.6905 | |
| 63 | Y | H | -0.8448 | |
| 64 | V | H | -1.3098 | |
| 65 | D | H | -3.0500 | |
| 66 | D | H | -3.0905 | |
| 67 | F | H | 0.0000 | |
| 68 | K | H | -2.9765 | |
| 69 | G | H | -1.9938 | |
| 70 | R | H | -1.7182 | |
| 71 | F | H | 0.0000 | |
| 72 | A | H | -0.9645 | |
| 73 | F | H | 0.0000 | |
| 74 | S | H | -0.5471 | |
| 75 | L | H | -0.4697 | |
| 76 | E | H | -1.0145 | |
| 77 | T | H | -0.4222 | |
| 78 | S | H | -0.4689 | |
| 79 | A | H | -0.5389 | |
| 80 | S | H | -0.6010 | |
| 81 | T | H | 0.0000 | |
| 82 | A | H | 0.0000 | |
| 83 | Y | H | -0.6623 | |
| 84 | L | H | 0.0000 | |
| 85 | E | H | -1.6287 | |
| 86 | I | H | 0.0000 | |
| 87 | N | H | -2.0702 | |
| 88 | N | H | -2.3998 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -2.9689 | |
| 91 | N | H | -2.9753 | |
| 92 | E | H | -2.7308 | |
| 93 | D | H | 0.0000 | |
| 94 | T | H | -1.1149 | |
| 95 | A | H | 0.0000 | |
| 96 | T | H | -0.3710 | |
| 97 | Y | H | 0.0000 | |
| 98 | F | H | 0.0000 | |
| 99 | C | H | 0.0000 | |
| 100 | T | H | 0.0000 | |
| 101 | R | H | -0.0681 | |
| 102 | G | H | 0.0000 | |
| 103 | D | H | 0.7268 | |
| 104 | Y | H | 1.7807 | |
| 105 | V | H | 2.3017 | |
| 106 | N | H | 1.0066 | |
| 107 | W | H | 1.0701 | |
| 108 | Y | H | 0.0000 | |
| 109 | F | H | -0.0735 | |
| 110 | D | H | -0.3297 | |
| 111 | V | H | -0.1367 | |
| 112 | W | H | -0.1604 | |
| 113 | G | H | 0.0000 | |
| 114 | A | H | -0.0671 | |
| 115 | G | H | -0.2335 | |
| 116 | T | H | 0.0000 | |
| 117 | T | H | -0.2855 | |
| 118 | V | H | 0.0000 | |
| 119 | T | H | -0.5689 | |
| 120 | V | H | 0.0000 | |
| 121 | S | H | -1.2491 | |
| 3 | G | L | -0.9070 | |
| 4 | D | L | -1.5333 | |
| 5 | V | L | 0.0000 | |
| 6 | V | L | 0.6846 | |
| 7 | M | L | 0.0000 | |
| 8 | T | L | 0.0907 | |
| 9 | Q | L | 0.0000 | |
| 10 | I | L | 1.5347 | |
| 11 | P | L | 1.4183 | |
| 12 | L | L | 1.7078 | |
| 13 | S | L | 0.4049 | |
| 14 | L | L | 0.0725 | |
| 15 | P | L | -0.7309 | |
| 16 | V | L | 0.0000 | |
| 17 | S | L | -0.7421 | |
| 18 | L | L | -0.4049 | |
| 19 | G | L | -1.5997 | |
| 20 | E | L | -2.3362 | |
| 21 | Q | L | -2.5249 | |
| 22 | A | L | 0.0000 | |
| 23 | S | L | -0.6282 | |
| 24 | I | L | 0.0000 | |
| 25 | S | L | -0.4255 | |
| 26 | C | L | 0.0000 | |
| 27 | R | L | -1.9981 | |
| 28 | S | L | 0.0000 | |
| 29 | S | L | -0.8203 | |
| 30 | Q | L | -1.1627 | |
| 31 | S | L | -0.7527 | |
| 32 | L | L | 0.0000 | |
| 33 | I | L | 0.4612 | |
| 34 | H | L | -0.6060 | |
| 35 | S | L | -0.8977 | |
| 36 | N | L | -1.6624 | |
| 37 | G | L | -1.2438 | |
| 38 | N | L | -1.1309 | |
| 39 | T | L | -0.3457 | |
| 40 | Y | L | 0.0000 | |
| 41 | L | L | 0.0000 | |
| 42 | H | L | 0.0000 | |
| 43 | W | L | 0.0000 | |
| 44 | Y | L | 0.0000 | |
| 45 | L | L | 0.0000 | |
| 46 | Q | L | -1.0844 | |
| 47 | K | L | -1.6059 | |
| 48 | P | L | -1.0642 | |
| 49 | G | L | -1.3632 | |
| 50 | Q | L | -1.9227 | |
| 51 | S | L | -1.2151 | |
| 52 | P | L | 0.0000 | |
| 53 | K | L | -1.6295 | |
| 54 | L | L | 0.0000 | |
| 55 | L | L | 0.0000 | |
| 56 | M | L | 0.0000 | |
| 57 | Y | L | 0.0000 | |
| 58 | K | L | -0.8984 | |
| 59 | V | L | -0.7401 | |
| 60 | S | L | -1.0719 | |
| 61 | N | L | -1.4805 | |
| 62 | R | L | -1.5020 | |
| 63 | F | L | -0.0391 | |
| 64 | Y | L | 0.8518 | |
| 65 | G | L | -0.1664 | |
| 66 | V | L | 0.0000 | |
| 67 | P | L | -1.1720 | |
| 68 | D | L | -2.2787 | |
| 69 | R | L | -2.0256 | |
| 70 | F | L | 0.0000 | |
| 71 | S | L | -1.2522 | |
| 72 | G | L | -0.9145 | |
| 73 | S | L | -0.8887 | |
| 74 | G | L | -1.0467 | |
| 75 | S | L | -0.7580 | |
| 76 | G | L | -0.7344 | |
| 77 | T | L | -1.3844 | |
| 78 | D | L | -2.0898 | |
| 79 | F | L | 0.0000 | |
| 80 | T | L | -0.8050 | |
| 81 | L | L | 0.0000 | |
| 82 | K | L | -1.5345 | |
| 83 | I | L | 0.0000 | |
| 84 | S | L | -2.4622 | |
| 85 | R | L | -3.0076 | |
| 86 | V | L | 0.0000 | |
| 87 | E | L | -1.7713 | |
| 88 | A | L | -0.9535 | |
| 89 | E | L | -2.0557 | |
| 90 | D | L | 0.0000 | |
| 91 | L | L | -0.6426 | |
| 92 | G | L | 0.0000 | |
| 93 | I | L | 0.0375 | |
| 94 | Y | L | 0.0000 | |
| 95 | F | L | 0.0000 | |
| 96 | C | L | 0.0000 | |
| 97 | S | L | 0.0000 | |
| 98 | Q | L | 0.0000 | |
| 99 | S | L | 0.0257 | |
| 100 | S | L | -0.0020 | |
| 101 | H | L | -0.3534 | |
| 102 | V | L | 0.8885 | |
| 103 | P | L | 0.2453 | |
| 104 | P | L | -0.1024 | |
| 105 | T | L | -0.3432 | |
| 106 | F | L | 0.0000 | |
| 107 | G | L | 0.0000 | |
| 108 | G | L | -0.7673 | |
| 109 | G | L | -0.2493 | |
| 110 | T | L | 0.0000 | |
| 111 | K | L | -0.5456 | |
| 112 | L | L | 0.0000 | |
| 113 | E | L | -0.8491 | |
| 114 | I | L | 0.4232 | |
| 115 | K | L | -1.0990 |