| Chain sequence(s) |
A: PLGLRNFCFAGDDRGHTRDIADRLAAAAPELTVHRVPYSLGPDAYLQAIRDAAAAGADVVVLGGSWPSVYDEARAALDGGAKRVIGIAGPDRIEDPATRAAVDRVKRELPEFSLQFFADEGAARDRDIDAFVAQLLAWAGRS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:24)
[INFO] Main: Simulation completed successfully. (00:02:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -0.3079 | |
| 2 | L | A | 0.8251 | |
| 3 | G | A | -0.3778 | |
| 4 | L | A | 0.0000 | |
| 5 | R | A | -2.2970 | |
| 6 | N | A | -1.4515 | |
| 7 | F | A | 0.0000 | |
| 8 | C | A | 0.0000 | |
| 9 | F | A | 0.0000 | |
| 10 | A | A | 0.0000 | |
| 11 | G | A | -0.9014 | |
| 12 | D | A | 0.0000 | |
| 13 | D | A | -2.1175 | |
| 14 | R | A | -2.6401 | |
| 15 | G | A | -2.0702 | |
| 16 | H | A | -1.7424 | |
| 17 | T | A | 0.0000 | |
| 18 | R | A | -2.6867 | |
| 19 | D | A | -2.2876 | |
| 20 | I | A | 0.0000 | |
| 21 | A | A | 0.0000 | |
| 22 | D | A | -2.5019 | |
| 23 | R | A | -1.9356 | |
| 24 | L | A | 0.0000 | |
| 25 | A | A | -1.0547 | |
| 26 | A | A | -0.8749 | |
| 27 | A | A | -0.8606 | |
| 28 | A | A | 0.0000 | |
| 29 | P | A | -1.2580 | |
| 30 | E | A | -2.0648 | |
| 31 | L | A | -1.4716 | |
| 32 | T | A | -0.8069 | |
| 33 | V | A | -0.9805 | |
| 34 | H | A | -1.1474 | |
| 35 | R | A | -2.1755 | |
| 36 | V | A | 0.0000 | |
| 37 | P | A | -0.6720 | |
| 38 | Y | A | 0.1068 | |
| 39 | S | A | 0.1962 | |
| 40 | L | A | 0.1875 | |
| 41 | G | A | -0.4878 | |
| 42 | P | A | -1.0266 | |
| 43 | D | A | -1.9205 | |
| 44 | A | A | -1.0974 | |
| 45 | Y | A | 0.0000 | |
| 46 | L | A | -1.2405 | |
| 47 | Q | A | -1.6163 | |
| 48 | A | A | -1.4558 | |
| 49 | I | A | 0.0000 | |
| 50 | R | A | -2.0169 | |
| 51 | D | A | -2.1011 | |
| 52 | A | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | A | A | -1.1187 | |
| 55 | A | A | -0.7182 | |
| 56 | G | A | -0.8074 | |
| 57 | A | A | 0.0000 | |
| 58 | D | A | -1.5127 | |
| 59 | V | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | V | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | G | A | 0.0135 | |
| 64 | G | A | 0.0000 | |
| 65 | S | A | -1.0732 | |
| 66 | W | A | 0.0947 | |
| 67 | P | A | -0.4059 | |
| 68 | S | A | -0.4039 | |
| 69 | V | A | 0.0000 | |
| 70 | Y | A | -1.3745 | |
| 71 | D | A | -1.8666 | |
| 72 | E | A | 0.0000 | |
| 73 | A | A | 0.0000 | |
| 74 | R | A | -1.7969 | |
| 75 | A | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | L | A | -1.8901 | |
| 78 | D | A | -2.4367 | |
| 79 | G | A | -2.0201 | |
| 80 | G | A | -1.7696 | |
| 81 | A | A | 0.0000 | |
| 82 | K | A | -2.2503 | |
| 83 | R | A | -1.9510 | |
| 84 | V | A | 0.0000 | |
| 85 | I | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | A | A | 0.0000 | |
| 89 | G | A | -1.7042 | |
| 90 | P | A | -1.8021 | |
| 91 | D | A | -3.6634 | |
| 92 | R | A | -3.6210 | |
| 93 | I | A | 0.0000 | |
| 94 | E | A | -4.1148 | |
| 95 | D | A | -3.4617 | |
| 96 | P | A | -1.8196 | |
| 97 | A | A | -1.0370 | |
| 98 | T | A | 0.0000 | |
| 99 | R | A | -2.5790 | |
| 100 | A | A | -1.5184 | |
| 101 | A | A | 0.0000 | |
| 102 | V | A | 0.0000 | |
| 103 | D | A | -2.4114 | |
| 104 | R | A | -3.0217 | |
| 105 | V | A | 0.0000 | |
| 106 | K | A | -3.6283 | |
| 107 | R | A | -3.7911 | |
| 108 | E | A | -3.1546 | |
| 109 | L | A | -2.1964 | |
| 110 | P | A | -1.9586 | |
| 111 | E | A | -2.0156 | |
| 112 | F | A | 0.0000 | |
| 113 | S | A | -0.8914 | |
| 114 | L | A | -0.1116 | |
| 115 | Q | A | -0.0850 | |
| 116 | F | A | 0.0532 | |
| 117 | F | A | 0.0000 | |
| 118 | A | A | -2.1315 | |
| 119 | D | A | -3.1985 | |
| 120 | E | A | -3.3761 | |
| 121 | G | A | -2.4322 | |
| 122 | A | A | -1.9999 | |
| 123 | A | A | -2.5707 | |
| 124 | R | A | -3.6884 | |
| 125 | D | A | -3.8125 | |
| 126 | R | A | -3.4396 | |
| 127 | D | A | -2.4501 | |
| 128 | I | A | 0.0000 | |
| 129 | D | A | -3.1354 | |
| 130 | A | A | -1.9330 | |
| 131 | F | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | A | A | -1.1966 | |
| 134 | Q | A | -1.3690 | |
| 135 | L | A | 0.0000 | |
| 136 | L | A | 0.0000 | |
| 137 | A | A | -1.0071 | |
| 138 | W | A | -0.5297 | |
| 139 | A | A | 0.0000 | |
| 140 | G | A | -1.5152 | |
| 141 | R | A | -2.1596 | |
| 142 | S | A | -1.1586 |