| Chain sequence(s) |
L: CGMGAGGSTC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:03)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 666 | C | L | 0.8062 | |
| 667 | G | L | -0.1643 | |
| 668 | M | L | 0.7493 | |
| 669 | G | L | -0.2883 | |
| 670 | A | L | -0.1106 | |
| 671 | G | L | -0.5409 | |
| 672 | G | L | -0.5907 | |
| 673 | S | L | -0.3117 | |
| 674 | T | L | 0.0262 | |
| 675 | C | L | 0.8778 |