Project name: 3E3B11

Status: done

Started: 2026-07-22 08:09:57
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Chain sequence(s) H: EVQLVETGGGLVQPNGSLKLSCAASGFTFNAVAMNWVRQAPGKGLEWVARIRSKSNNFATYYADSVKDRFTISRDDSQNLLYLQMNSLKTEDTAMYYCVRGGSPYALDYWGQGTSVTVSS
L: DIVMTQSPATLSVTPGDRVSLSCRASQSISDYLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGSDFTLSINSVEPEDVGVYYCQNGHSIPPTFGAGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:52)
Show buried residues

Minimal score value
-2.9818
Maximal score value
1.2781
Average score
-0.6126
Total score value
-139.0687

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9862
2 V H -0.9524
3 Q H -0.7317
4 L H 0.0000
5 V H 1.2781
6 E H 0.0000
7 T H -0.1866
8 G H -0.7081
9 G H -0.3163
11 G H 0.2900
12 L H 1.1645
13 V H -0.1385
14 Q H -1.4957
15 P H -1.9056
16 N H -2.2142
17 G H -1.3548
18 S H -1.2957
19 L H -0.7199
20 K H -1.5228
21 L H 0.0000
22 S H -0.0222
23 C H 0.0000
24 A H 0.2656
25 A H 0.0000
26 S H -0.5738
27 G H -1.1047
28 F H -0.4144
29 T H -0.2356
30 F H 0.0000
35 N H -1.2980
36 A H -0.6180
37 V H -0.4010
38 A H 0.0000
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H 0.0000
45 A H -1.1737
46 P H -0.9826
47 G H -1.4274
48 K H -2.1301
49 G H -1.1231
50 L H 0.0000
51 E H -0.8380
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 R H 0.0000
56 I H 0.0000
57 R H -1.4172
58 S H -1.7822
59 K H -2.7200
60 S H -1.9721
61 N H -2.3171
62 N H -2.3407
63 F H -1.3211
64 A H -0.8695
65 T H -0.1050
66 Y H 0.2714
67 Y H -0.5247
68 A H -1.2920
69 D H -2.4279
70 S H -1.8050
71 V H 0.0000
72 K H -2.5538
74 D H -2.7717
75 R H -2.0633
76 F H 0.0000
77 T H -0.8593
78 I H 0.0000
79 S H -0.1573
80 R H 0.0000
81 D H -1.0309
82 D H -1.4953
83 S H -1.2187
84 Q H -1.5951
85 N H -1.2365
86 L H -0.2849
87 L H 0.0000
88 Y H -0.2639
89 L H 0.0000
90 Q H -1.0037
91 M H 0.0000
92 N H -1.6341
93 S H -1.7506
94 L H 0.0000
95 K H -2.4585
96 T H -1.8777
97 E H -2.2807
98 D H 0.0000
99 T H -0.6962
100 A H 0.0000
101 M H -0.0404
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 V H 0.0000
106 R H -0.0031
107 G H 0.0000
108 G H -0.1527
109 S H -0.2908
110 P H 0.0865
113 Y H 0.2007
114 A H 0.0000
115 L H 0.0000
116 D H 0.0471
117 Y H 0.4830
118 W H 0.1176
119 G H 0.0000
120 Q H -1.1135
121 G H -0.4797
122 T H 0.0000
123 S H -0.2033
124 V H 0.0000
125 T H -0.0872
126 V H 0.0000
127 S H -0.8082
128 S H -0.6647
1 D L -1.3125
2 I L 0.0000
3 V L 0.8052
4 M L 0.0000
5 T L -0.4710
6 Q L 0.0000
7 S L -0.6259
8 P L -0.3220
9 A L -0.2181
10 T L -0.4125
11 L L -0.3232
12 S L -0.6395
13 V L 0.0000
14 T L -1.4682
15 P L -1.6144
16 G L -1.8658
17 D L -2.4132
18 R L -2.9818
19 V L 0.0000
20 S L -0.8552
21 L L 0.0000
22 S L -0.9219
23 C L 0.0000
24 R L -2.4160
25 A L 0.0000
26 S L -0.9700
27 Q L -1.5383
28 S L -1.4451
29 I L 0.0000
36 S L -0.9985
37 D L -1.4520
38 Y L -0.1613
39 L L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.6807
45 K L -0.9445
46 S L -0.8966
47 H L -1.6853
48 E L -1.6738
49 S L -1.0162
50 P L 0.0000
51 R L -0.5079
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 K L -0.5261
56 Y L -0.4865
57 A L 0.0000
65 S L -1.1012
66 Q L -1.5130
67 S L -0.8557
68 I L -0.3523
69 S L -0.2941
70 G L -0.4383
71 I L -0.1721
72 P L -0.2695
74 S L -0.6160
75 R L -1.2012
76 F L 0.0000
77 S L -0.8788
78 G L -0.6536
79 S L -0.9382
80 G L -1.2246
83 S L -1.3358
84 G L -1.3886
85 S L -1.9929
86 D L -2.4952
87 F L 0.0000
88 T L -0.8343
89 L L 0.0000
90 S L 0.0000
91 I L 0.0000
92 N L -2.5601
93 S L -2.1323
94 V L 0.0000
95 E L -1.4916
96 P L -1.0679
97 E L -0.9608
98 D L 0.0000
99 V L 0.1301
100 G L -0.2801
101 V L -0.0140
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 N L 0.0000
107 G L 0.0000
108 H L -0.4217
109 S L -0.0452
114 I L 0.7749
115 P L -0.0325
116 P L -0.0431
117 T L 0.0872
118 F L 0.3163
119 G L 0.0000
120 A L -0.1842
121 G L 0.0000
122 T L 0.0000
123 K L -0.7864
124 L L 0.0000
125 E L -0.6477
126 L L -0.7747
127 K L -1.7038
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Laboratory of Theory of Biopolymers 2018