| Chain sequence(s) |
H: EVQLVETGGGLVQPNGSLKLSCAASGFTFNAVAMNWVRQAPGKGLEWVARIRSKSNNFATYYADSVKDRFTISRDDSQNLLYLQMNSLKTEDTAMYYCVRGGSPYALDYWGQGTSVTVSS
L: DIVMTQSPATLSVTPGDRVSLSCRASQSISDYLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGSDFTLSINSVEPEDVGVYYCQNGHSIPPTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:49)
[INFO] Main: Simulation completed successfully. (00:01:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9862 | |
| 2 | V | H | -0.9524 | |
| 3 | Q | H | -0.7317 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2781 | |
| 6 | E | H | 0.0000 | |
| 7 | T | H | -0.1866 | |
| 8 | G | H | -0.7081 | |
| 9 | G | H | -0.3163 | |
| 11 | G | H | 0.2900 | |
| 12 | L | H | 1.1645 | |
| 13 | V | H | -0.1385 | |
| 14 | Q | H | -1.4957 | |
| 15 | P | H | -1.9056 | |
| 16 | N | H | -2.2142 | |
| 17 | G | H | -1.3548 | |
| 18 | S | H | -1.2957 | |
| 19 | L | H | -0.7199 | |
| 20 | K | H | -1.5228 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.0222 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.2656 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.5738 | |
| 27 | G | H | -1.1047 | |
| 28 | F | H | -0.4144 | |
| 29 | T | H | -0.2356 | |
| 30 | F | H | 0.0000 | |
| 35 | N | H | -1.2980 | |
| 36 | A | H | -0.6180 | |
| 37 | V | H | -0.4010 | |
| 38 | A | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | A | H | -1.1737 | |
| 46 | P | H | -0.9826 | |
| 47 | G | H | -1.4274 | |
| 48 | K | H | -2.1301 | |
| 49 | G | H | -1.1231 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8380 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | R | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -1.4172 | |
| 58 | S | H | -1.7822 | |
| 59 | K | H | -2.7200 | |
| 60 | S | H | -1.9721 | |
| 61 | N | H | -2.3171 | |
| 62 | N | H | -2.3407 | |
| 63 | F | H | -1.3211 | |
| 64 | A | H | -0.8695 | |
| 65 | T | H | -0.1050 | |
| 66 | Y | H | 0.2714 | |
| 67 | Y | H | -0.5247 | |
| 68 | A | H | -1.2920 | |
| 69 | D | H | -2.4279 | |
| 70 | S | H | -1.8050 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5538 | |
| 74 | D | H | -2.7717 | |
| 75 | R | H | -2.0633 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8593 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1573 | |
| 80 | R | H | 0.0000 | |
| 81 | D | H | -1.0309 | |
| 82 | D | H | -1.4953 | |
| 83 | S | H | -1.2187 | |
| 84 | Q | H | -1.5951 | |
| 85 | N | H | -1.2365 | |
| 86 | L | H | -0.2849 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.2639 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0037 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.6341 | |
| 93 | S | H | -1.7506 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.4585 | |
| 96 | T | H | -1.8777 | |
| 97 | E | H | -2.2807 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6962 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | -0.0404 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | R | H | -0.0031 | |
| 107 | G | H | 0.0000 | |
| 108 | G | H | -0.1527 | |
| 109 | S | H | -0.2908 | |
| 110 | P | H | 0.0865 | |
| 113 | Y | H | 0.2007 | |
| 114 | A | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | 0.0471 | |
| 117 | Y | H | 0.4830 | |
| 118 | W | H | 0.1176 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1135 | |
| 121 | G | H | -0.4797 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.2033 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0872 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8082 | |
| 128 | S | H | -0.6647 | |
| 1 | D | L | -1.3125 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.8052 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.4710 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6259 | |
| 8 | P | L | -0.3220 | |
| 9 | A | L | -0.2181 | |
| 10 | T | L | -0.4125 | |
| 11 | L | L | -0.3232 | |
| 12 | S | L | -0.6395 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -1.4682 | |
| 15 | P | L | -1.6144 | |
| 16 | G | L | -1.8658 | |
| 17 | D | L | -2.4132 | |
| 18 | R | L | -2.9818 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.8552 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.9219 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.4160 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.9700 | |
| 27 | Q | L | -1.5383 | |
| 28 | S | L | -1.4451 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.9985 | |
| 37 | D | L | -1.4520 | |
| 38 | Y | L | -0.1613 | |
| 39 | L | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.6807 | |
| 45 | K | L | -0.9445 | |
| 46 | S | L | -0.8966 | |
| 47 | H | L | -1.6853 | |
| 48 | E | L | -1.6738 | |
| 49 | S | L | -1.0162 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.5079 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | K | L | -0.5261 | |
| 56 | Y | L | -0.4865 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -1.1012 | |
| 66 | Q | L | -1.5130 | |
| 67 | S | L | -0.8557 | |
| 68 | I | L | -0.3523 | |
| 69 | S | L | -0.2941 | |
| 70 | G | L | -0.4383 | |
| 71 | I | L | -0.1721 | |
| 72 | P | L | -0.2695 | |
| 74 | S | L | -0.6160 | |
| 75 | R | L | -1.2012 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.8788 | |
| 78 | G | L | -0.6536 | |
| 79 | S | L | -0.9382 | |
| 80 | G | L | -1.2246 | |
| 83 | S | L | -1.3358 | |
| 84 | G | L | -1.3886 | |
| 85 | S | L | -1.9929 | |
| 86 | D | L | -2.4952 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8343 | |
| 89 | L | L | 0.0000 | |
| 90 | S | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.5601 | |
| 93 | S | L | -2.1323 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.4916 | |
| 96 | P | L | -1.0679 | |
| 97 | E | L | -0.9608 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | 0.1301 | |
| 100 | G | L | -0.2801 | |
| 101 | V | L | -0.0140 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | N | L | 0.0000 | |
| 107 | G | L | 0.0000 | |
| 108 | H | L | -0.4217 | |
| 109 | S | L | -0.0452 | |
| 114 | I | L | 0.7749 | |
| 115 | P | L | -0.0325 | |
| 116 | P | L | -0.0431 | |
| 117 | T | L | 0.0872 | |
| 118 | F | L | 0.3163 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.1842 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.7864 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.6477 | |
| 126 | L | L | -0.7747 | |
| 127 | K | L | -1.7038 |