Project name: CMProt B1 Model2

Status: done

Started: 2026-02-12 14:23:27
Settings
Chain sequence(s) A: SSLFTFLCLAVFINGCLSQI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:09)
Show buried residues

Minimal score value
0.2958
Maximal score value
4.4826
Average score
2.634
Total score value
52.6807

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A 0.9569
2 S A 1.7363
3 L A 3.4931
4 F A 3.8537
5 T A 3.0615
6 F A 4.4233
7 L A 4.4826
8 C A 3.6808
9 L A 4.1322
10 A A 3.2462
11 V A 3.2756
12 F A 3.6899
13 I A 3.2135
14 N A 1.0732
15 G A 1.2648
16 C A 1.2761
17 L A 2.1974
18 S A 1.3783
19 Q A 0.2958
20 I A 1.9495
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Laboratory of Theory of Biopolymers 2018