| Chain sequence(s) |
A: SSLFTFLCLAVFINGCLSQI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.9569 | |
| 2 | S | A | 1.7363 | |
| 3 | L | A | 3.4931 | |
| 4 | F | A | 3.8537 | |
| 5 | T | A | 3.0615 | |
| 6 | F | A | 4.4233 | |
| 7 | L | A | 4.4826 | |
| 8 | C | A | 3.6808 | |
| 9 | L | A | 4.1322 | |
| 10 | A | A | 3.2462 | |
| 11 | V | A | 3.2756 | |
| 12 | F | A | 3.6899 | |
| 13 | I | A | 3.2135 | |
| 14 | N | A | 1.0732 | |
| 15 | G | A | 1.2648 | |
| 16 | C | A | 1.2761 | |
| 17 | L | A | 2.1974 | |
| 18 | S | A | 1.3783 | |
| 19 | Q | A | 0.2958 | |
| 20 | I | A | 1.9495 |