Project name: query_structure

Status: done

Started: 2026-03-17 00:14:29
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Chain sequence(s) A: MVQLQESGGGSVQAGGSLRLSCVASGDTASMYCMGWFRQAPGKEREEVATIDSDGSVSIIDSLKGRFTISKDSANNALYLHMNSLRPEDTANYYCAAGRPPCGSYFLPGYYYYGMDYWGKGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:21)
Show buried residues

Minimal score value
-3.6755
Maximal score value
3.2563
Average score
-0.611
Total score value
-78.2017

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1286
2 V A 0.0000
3 Q A -1.5977
4 L A 0.0000
5 Q A -1.4014
6 E A 0.0000
7 S A -0.5122
8 G A -0.7956
9 G A -0.3059
10 G A -0.1898
11 S A -0.3331
12 V A -0.8291
13 Q A -1.6309
14 A A -1.6954
15 G A -1.4540
16 G A -1.2303
17 S A -1.5412
18 L A -1.3306
19 R A -2.2234
20 L A 0.0000
21 S A -0.6049
22 C A 0.0000
23 V A -0.0177
24 A A 0.0000
25 S A -1.2150
26 G A -1.4102
27 D A -1.9555
28 T A -1.2008
29 A A -0.6826
30 S A -0.7141
31 M A 0.0000
32 Y A -0.1967
33 C A 0.0000
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 F A 0.0000
38 R A -1.7243
39 Q A -2.3686
40 A A 0.0000
41 P A -1.5418
42 G A -1.9504
43 K A -3.4040
44 E A -3.6755
45 R A -2.9890
46 E A -2.7564
47 E A -1.6856
48 V A 0.0000
49 A A 0.0000
50 T A 0.0000
51 I A 0.0000
52 D A -0.8078
53 S A -1.0499
54 D A -1.9488
55 G A -1.2605
56 S A -0.5073
57 V A 0.6642
58 S A 0.0235
59 I A -0.3935
60 I A -1.1625
61 D A -2.2462
62 S A -1.5043
63 L A 0.0000
64 K A -2.4774
65 G A -1.8417
66 R A -1.6715
67 F A 0.0000
68 T A -0.7783
69 I A 0.0000
70 S A -0.4242
71 K A -1.2593
72 D A -1.2173
73 S A -1.1580
74 A A -1.0007
75 N A -1.5426
76 N A -1.0599
77 A A 0.0000
78 L A 0.0000
79 Y A -0.5088
80 L A 0.0000
81 H A -1.3764
82 M A 0.0000
83 N A -2.1210
84 S A -1.5079
85 L A 0.0000
86 R A -2.2812
87 P A -1.8255
88 E A -2.2496
89 D A 0.0000
90 T A -0.8137
91 A A 0.0000
92 N A -0.1843
93 Y A 0.0000
94 Y A -0.6931
95 C A 0.0000
96 A A 0.0000
97 A A 0.0000
98 G A 0.0000
99 R A -1.9430
100 P A -0.8983
101 P A -0.2600
102 C A 0.2160
103 G A 1.0157
104 S A 1.0092
105 Y A 2.4179
106 F A 3.2563
107 L A 2.6493
108 P A 0.8438
109 G A 0.7759
110 Y A 2.1173
111 Y A 1.3791
112 Y A 0.8745
113 Y A 1.4846
114 G A -0.0531
115 M A 0.0000
116 D A -1.7299
117 Y A -0.9519
118 W A -0.7643
119 G A -1.0964
120 K A -2.0011
121 G A 0.0000
122 T A -0.0190
123 L A 1.1555
124 V A 0.0000
125 T A -0.3838
126 V A 0.0000
127 S A -1.1986
128 S A -0.8768
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Laboratory of Theory of Biopolymers 2018