| Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFRGYGISWVRQAPGQGLEWMGWISAYGGETNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREAGSSWYDFDLWGRGTLVTVSS
L: DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGASFPITFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.2008 | |
| 2 | V | H | -0.4895 | |
| 3 | Q | H | -0.8643 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | -0.4488 | |
| 6 | Q | H | -0.7719 | |
| 7 | S | H | -0.7112 | |
| 8 | G | H | -0.6070 | |
| 9 | A | H | 0.3397 | |
| 11 | E | H | 0.2739 | |
| 12 | V | H | 1.0923 | |
| 13 | K | H | -0.9317 | |
| 14 | K | H | -2.2177 | |
| 15 | P | H | -2.3962 | |
| 16 | G | H | -1.7627 | |
| 17 | A | H | -1.4149 | |
| 18 | S | H | -1.4298 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.4361 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.5287 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.0154 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.6319 | |
| 27 | G | H | -0.7204 | |
| 28 | Y | H | -0.4615 | |
| 29 | T | H | -0.6170 | |
| 30 | F | H | 0.0000 | |
| 35 | R | H | -1.4401 | |
| 36 | G | H | -0.9009 | |
| 37 | Y | H | -0.2773 | |
| 38 | G | H | -0.4046 | |
| 39 | I | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.4964 | |
| 45 | A | H | -0.8838 | |
| 46 | P | H | -0.9113 | |
| 47 | G | H | -1.2439 | |
| 48 | Q | H | -1.7369 | |
| 49 | G | H | -1.1391 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7894 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | W | H | -0.2915 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | -0.7970 | |
| 58 | A | H | 0.0000 | |
| 59 | Y | H | 0.0359 | |
| 62 | G | H | -0.8670 | |
| 63 | G | H | -1.2402 | |
| 64 | E | H | -2.0342 | |
| 65 | T | H | -1.1685 | |
| 66 | N | H | -0.7850 | |
| 67 | Y | H | -0.6712 | |
| 68 | A | H | 0.0000 | |
| 69 | Q | H | -2.5702 | |
| 70 | K | H | -2.6903 | |
| 71 | L | H | 0.0000 | |
| 72 | Q | H | -2.3773 | |
| 74 | G | H | -1.5990 | |
| 75 | R | H | -1.3572 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.5983 | |
| 78 | M | H | 0.0000 | |
| 79 | T | H | -0.5093 | |
| 80 | T | H | -0.5066 | |
| 81 | D | H | -0.7360 | |
| 82 | T | H | -0.6063 | |
| 83 | S | H | -0.4243 | |
| 84 | T | H | -0.5324 | |
| 85 | S | H | -0.8860 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3273 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -0.9627 | |
| 91 | L | H | 0.0000 | |
| 92 | R | H | -1.4930 | |
| 93 | S | H | -1.5062 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.2111 | |
| 96 | S | H | -2.4273 | |
| 97 | D | H | -2.5654 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7336 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.4537 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.2339 | |
| 107 | E | H | 0.0000 | |
| 108 | A | H | -0.2996 | |
| 109 | G | H | -0.5342 | |
| 110 | S | H | -0.3635 | |
| 111 | S | H | -0.1581 | |
| 112 | W | H | 0.3094 | |
| 113 | Y | H | 0.1675 | |
| 114 | D | H | -0.1119 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.6551 | |
| 117 | L | H | -0.5080 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | R | H | -2.1369 | |
| 121 | G | H | -1.0027 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 0.9517 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0858 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.2980 | |
| 128 | S | H | -1.0597 | |
| 1 | D | L | -2.1599 | |
| 2 | I | L | -1.5593 | |
| 3 | Q | L | -2.1688 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3089 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7874 | |
| 8 | P | L | -0.5756 | |
| 9 | S | L | -0.7349 | |
| 10 | S | L | -0.8901 | |
| 11 | V | L | -0.4636 | |
| 12 | S | L | -0.6367 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | 0.0095 | |
| 15 | V | L | 0.9113 | |
| 16 | G | L | -0.3559 | |
| 17 | D | L | -1.3953 | |
| 18 | R | L | -2.1161 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5687 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8243 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.7976 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9913 | |
| 27 | Q | L | -2.2717 | |
| 28 | G | L | -1.4970 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.5498 | |
| 37 | S | L | -0.2078 | |
| 38 | W | L | 0.4371 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.7766 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.7319 | |
| 46 | P | L | -1.3029 | |
| 47 | G | L | -1.7254 | |
| 48 | K | L | -2.6999 | |
| 49 | A | L | -1.7655 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.2114 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0815 | |
| 56 | A | L | 0.0144 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5792 | |
| 66 | N | L | -0.7403 | |
| 67 | L | L | -0.0280 | |
| 68 | Q | L | -0.4558 | |
| 69 | S | L | -0.4965 | |
| 70 | G | L | -0.4817 | |
| 71 | V | L | -0.2615 | |
| 72 | P | L | -0.3196 | |
| 74 | S | L | -0.3897 | |
| 75 | R | L | -0.8128 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4451 | |
| 78 | G | L | -0.3977 | |
| 79 | S | L | -0.7160 | |
| 80 | G | L | -1.0327 | |
| 83 | S | L | -0.9857 | |
| 84 | G | L | -1.2576 | |
| 85 | T | L | -1.8339 | |
| 86 | D | L | -2.1331 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7165 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6142 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3671 | |
| 93 | S | L | -1.0160 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.6125 | |
| 96 | P | L | -0.5471 | |
| 97 | E | L | -1.6483 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3208 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8318 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.4061 | |
| 108 | A | L | 0.1533 | |
| 109 | S | L | 0.0681 | |
| 114 | F | L | 0.2967 | |
| 115 | P | L | -0.4301 | |
| 116 | I | L | 0.0000 | |
| 117 | T | L | -0.5727 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0429 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4002 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.6773 | |
| 126 | I | L | 0.9925 | |
| 127 | K | L | -0.7915 |