Project name: 7ST5

Status: done

Started: 2026-03-29 09:52:49
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Chain sequence(s) H: QVQLVQSGAEVKKPGASVKVSCKASGYTFRGYGISWVRQAPGQGLEWMGWISAYGGETNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREAGSSWYDFDLWGRGTLVTVSS
L: DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGASFPITFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-3.2111
Maximal score value
1.0923
Average score
-0.5808
Total score value
-131.8386

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.2008
2 V H -0.4895
3 Q H -0.8643
4 L H 0.0000
5 V H -0.4488
6 Q H -0.7719
7 S H -0.7112
8 G H -0.6070
9 A H 0.3397
11 E H 0.2739
12 V H 1.0923
13 K H -0.9317
14 K H -2.2177
15 P H -2.3962
16 G H -1.7627
17 A H -1.4149
18 S H -1.4298
19 V H 0.0000
20 K H -1.4361
21 V H 0.0000
22 S H -0.5287
23 C H 0.0000
24 K H -1.0154
25 A H 0.0000
26 S H -0.6319
27 G H -0.7204
28 Y H -0.4615
29 T H -0.6170
30 F H 0.0000
35 R H -1.4401
36 G H -0.9009
37 Y H -0.2773
38 G H -0.4046
39 I H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.4964
45 A H -0.8838
46 P H -0.9113
47 G H -1.2439
48 Q H -1.7369
49 G H -1.1391
50 L H 0.0000
51 E H -0.7894
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 W H -0.2915
56 I H 0.0000
57 S H -0.7970
58 A H 0.0000
59 Y H 0.0359
62 G H -0.8670
63 G H -1.2402
64 E H -2.0342
65 T H -1.1685
66 N H -0.7850
67 Y H -0.6712
68 A H 0.0000
69 Q H -2.5702
70 K H -2.6903
71 L H 0.0000
72 Q H -2.3773
74 G H -1.5990
75 R H -1.3572
76 V H 0.0000
77 T H -0.5983
78 M H 0.0000
79 T H -0.5093
80 T H -0.5066
81 D H -0.7360
82 T H -0.6063
83 S H -0.4243
84 T H -0.5324
85 S H -0.8860
86 T H 0.0000
87 A H 0.0000
88 Y H -0.3273
89 M H 0.0000
90 E H -0.9627
91 L H 0.0000
92 R H -1.4930
93 S H -1.5062
94 L H 0.0000
95 R H -3.2111
96 S H -2.4273
97 D H -2.5654
98 D H 0.0000
99 T H -0.7336
100 A H 0.0000
101 V H 0.4537
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.2339
107 E H 0.0000
108 A H -0.2996
109 G H -0.5342
110 S H -0.3635
111 S H -0.1581
112 W H 0.3094
113 Y H 0.1675
114 D H -0.1119
115 F H 0.0000
116 D H -0.6551
117 L H -0.5080
118 W H 0.0000
119 G H 0.0000
120 R H -2.1369
121 G H -1.0027
122 T H 0.0000
123 L H 0.9517
124 V H 0.0000
125 T H -0.0858
126 V H 0.0000
127 S H -1.2980
128 S H -1.0597
1 D L -2.1599
2 I L -1.5593
3 Q L -2.1688
4 M L 0.0000
5 T L -1.3089
6 Q L 0.0000
7 S L -0.7874
8 P L -0.5756
9 S L -0.7349
10 S L -0.8901
11 V L -0.4636
12 S L -0.6367
13 A L 0.0000
14 S L 0.0095
15 V L 0.9113
16 G L -0.3559
17 D L -1.3953
18 R L -2.1161
19 V L 0.0000
20 T L -0.5687
21 I L 0.0000
22 T L -0.8243
23 C L 0.0000
24 R L -2.7976
25 A L 0.0000
26 S L -1.9913
27 Q L -2.2717
28 G L -1.4970
29 I L 0.0000
36 S L -0.5498
37 S L -0.2078
38 W L 0.4371
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.7766
44 Q L 0.0000
45 K L -1.7319
46 P L -1.3029
47 G L -1.7254
48 K L -2.6999
49 A L -1.7655
50 P L 0.0000
51 K L -1.2114
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.0815
56 A L 0.0144
57 A L 0.0000
65 S L -0.5792
66 N L -0.7403
67 L L -0.0280
68 Q L -0.4558
69 S L -0.4965
70 G L -0.4817
71 V L -0.2615
72 P L -0.3196
74 S L -0.3897
75 R L -0.8128
76 F L 0.0000
77 S L -0.4451
78 G L -0.3977
79 S L -0.7160
80 G L -1.0327
83 S L -0.9857
84 G L -1.2576
85 T L -1.8339
86 D L -2.1331
87 F L 0.0000
88 T L -0.7165
89 L L 0.0000
90 T L -0.6142
91 I L 0.0000
92 S L -1.3671
93 S L -1.0160
94 L L 0.0000
95 Q L -0.6125
96 P L -0.5471
97 E L -1.6483
98 D L 0.0000
99 F L -0.3208
100 A L 0.0000
101 T L -0.8318
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 G L 0.4061
108 A L 0.1533
109 S L 0.0681
114 F L 0.2967
115 P L -0.4301
116 I L 0.0000
117 T L -0.5727
118 F L 0.0000
119 G L 0.0000
120 G L -1.0429
121 G L 0.0000
122 T L 0.0000
123 K L -1.4002
124 V L 0.0000
125 E L -0.6773
126 I L 0.9925
127 K L -0.7915
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Laboratory of Theory of Biopolymers 2018