| Chain sequence(s) |
A: MEENLKGLYAALLVPFDENGQVKEEGLKAIAKNAIENEELDGLYVNGSSGENFLINTEQKKQIFKIAKEAVGDDVKMIAQIGSLDLNEAIELGKYATELGYDALSAVTPFYYPLSFEEIKQYYFDLIEATQNKMIIYSIPDLTGVNIDVDQFGELFNHEKIIGVKYTAPNFFLLERLRKAYPDKLIFSGFDEMLIQAVISGVDGAIGSTYNVNGKRSRQIFELAQQGKVDEAYQVQHETNDIIAKILELGLYPTLKEILKYRGIDSGLPKRPFAPFNEENRAALDELVNKYNL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:20)
[INFO] Main: Simulation completed successfully. (00:06:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -1.2227 | |
| 2 | E | A | -1.9343 | |
| 3 | E | A | -2.8925 | |
| 4 | N | A | -2.5867 | |
| 5 | L | A | 0.0000 | |
| 6 | K | A | -1.7519 | |
| 7 | G | A | -0.9779 | |
| 8 | L | A | 0.0000 | |
| 9 | Y | A | 0.0000 | |
| 10 | A | A | 0.0000 | |
| 11 | A | A | 0.0000 | |
| 12 | L | A | 0.0000 | |
| 13 | L | A | 0.0000 | |
| 14 | V | A | 0.0000 | |
| 15 | P | A | 0.0000 | |
| 16 | F | A | 0.0000 | |
| 17 | D | A | -2.1204 | |
| 18 | E | A | -3.1054 | |
| 19 | N | A | -2.9183 | |
| 20 | G | A | -2.3840 | |
| 21 | Q | A | -2.2640 | |
| 22 | V | A | -1.7040 | |
| 23 | K | A | -2.0325 | |
| 24 | E | A | -2.6131 | |
| 25 | E | A | -2.8998 | |
| 26 | G | A | 0.0000 | |
| 27 | L | A | 0.0000 | |
| 28 | K | A | -2.3139 | |
| 29 | A | A | -1.5159 | |
| 30 | I | A | 0.0000 | |
| 31 | A | A | 0.0000 | |
| 32 | K | A | -1.7845 | |
| 33 | N | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | I | A | -1.8261 | |
| 36 | E | A | -2.9669 | |
| 37 | N | A | -2.7405 | |
| 38 | E | A | 0.0000 | |
| 39 | E | A | -3.2337 | |
| 40 | L | A | 0.0000 | |
| 41 | D | A | -1.5708 | |
| 42 | G | A | 0.0000 | |
| 43 | L | A | 0.0000 | |
| 44 | Y | A | 0.0000 | |
| 45 | V | A | 0.0000 | |
| 46 | N | A | 0.0000 | |
| 47 | G | A | 0.0000 | |
| 48 | S | A | 0.3614 | |
| 49 | S | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | E | A | 0.0000 | |
| 52 | N | A | 0.0000 | |
| 53 | F | A | 0.9037 | |
| 54 | L | A | 0.2990 | |
| 55 | I | A | 0.0000 | |
| 56 | N | A | -1.7813 | |
| 57 | T | A | -1.9660 | |
| 58 | E | A | -2.5572 | |
| 59 | Q | A | -1.9534 | |
| 60 | K | A | 0.0000 | |
| 61 | K | A | -1.7584 | |
| 62 | Q | A | -1.6720 | |
| 63 | I | A | 0.0000 | |
| 64 | F | A | 0.0000 | |
| 65 | K | A | -1.4816 | |
| 66 | I | A | 0.0000 | |
| 67 | A | A | 0.0000 | |
| 68 | K | A | -1.7282 | |
| 69 | E | A | -2.4229 | |
| 70 | A | A | -1.9427 | |
| 71 | V | A | -1.7050 | |
| 72 | G | A | -2.1502 | |
| 73 | D | A | -3.1820 | |
| 74 | D | A | -2.7962 | |
| 75 | V | A | 0.0000 | |
| 76 | K | A | -1.6405 | |
| 77 | M | A | 0.0000 | |
| 78 | I | A | 0.0000 | |
| 79 | A | A | 0.0000 | |
| 80 | Q | A | 0.0000 | |
| 81 | I | A | 0.0000 | |
| 82 | G | A | 0.0000 | |
| 83 | S | A | -0.0719 | |
| 84 | L | A | 0.4488 | |
| 85 | D | A | -1.4743 | |
| 86 | L | A | -0.9622 | |
| 87 | N | A | -1.8376 | |
| 88 | E | A | -1.6764 | |
| 89 | A | A | 0.0000 | |
| 90 | I | A | -1.3801 | |
| 91 | E | A | -1.9333 | |
| 92 | L | A | 0.0000 | |
| 93 | G | A | 0.0000 | |
| 94 | K | A | -1.8117 | |
| 95 | Y | A | -1.2843 | |
| 96 | A | A | 0.0000 | |
| 97 | T | A | -1.7311 | |
| 98 | E | A | -1.9752 | |
| 99 | L | A | -1.3781 | |
| 100 | G | A | -1.5110 | |
| 101 | Y | A | 0.0000 | |
| 102 | D | A | -1.3796 | |
| 103 | A | A | 0.0000 | |
| 104 | L | A | 0.0000 | |
| 105 | S | A | 0.0000 | |
| 106 | A | A | 0.0000 | |
| 107 | V | A | 0.0000 | |
| 108 | T | A | 0.0000 | |
| 109 | P | A | 0.0000 | |
| 110 | F | A | 1.7153 | |
| 111 | Y | A | 2.3321 | |
| 112 | Y | A | 2.1296 | |
| 113 | P | A | 0.7718 | |
| 114 | L | A | 0.2660 | |
| 115 | S | A | -0.9540 | |
| 116 | F | A | -1.6944 | |
| 117 | E | A | -3.1270 | |
| 118 | E | A | -2.9799 | |
| 119 | I | A | 0.0000 | |
| 120 | K | A | -2.3465 | |
| 121 | Q | A | -2.3733 | |
| 122 | Y | A | 0.0000 | |
| 123 | Y | A | 0.0000 | |
| 124 | F | A | -1.3289 | |
| 125 | D | A | -1.5151 | |
| 126 | L | A | 0.0000 | |
| 127 | I | A | 0.0000 | |
| 128 | E | A | -2.3233 | |
| 129 | A | A | -1.6956 | |
| 130 | T | A | 0.0000 | |
| 131 | Q | A | -2.2250 | |
| 132 | N | A | -1.7129 | |
| 133 | K | A | -1.7158 | |
| 134 | M | A | 0.0000 | |
| 135 | I | A | 0.0000 | |
| 136 | I | A | 0.0000 | |
| 137 | Y | A | 0.0000 | |
| 138 | S | A | 0.0000 | |
| 139 | I | A | -0.2204 | |
| 140 | P | A | -0.8393 | |
| 141 | D | A | -1.3552 | |
| 142 | L | A | 0.6990 | |
| 143 | T | A | 0.4022 | |
| 144 | G | A | -0.3658 | |
| 145 | V | A | -0.3848 | |
| 146 | N | A | -1.7913 | |
| 147 | I | A | 0.0000 | |
| 148 | D | A | -2.3887 | |
| 149 | V | A | 0.0000 | |
| 150 | D | A | -2.8753 | |
| 151 | Q | A | -2.6417 | |
| 152 | F | A | 0.0000 | |
| 153 | G | A | -2.1454 | |
| 154 | E | A | -2.9173 | |
| 155 | L | A | 0.0000 | |
| 156 | F | A | 0.0000 | |
| 157 | N | A | -2.4975 | |
| 158 | H | A | -2.0631 | |
| 159 | E | A | -2.6056 | |
| 160 | K | A | -2.2616 | |
| 161 | I | A | 0.0000 | |
| 162 | I | A | 0.0000 | |
| 163 | G | A | 0.0000 | |
| 164 | V | A | 0.0000 | |
| 165 | K | A | 0.0000 | |
| 166 | Y | A | 0.0000 | |
| 167 | T | A | 0.0000 | |
| 168 | A | A | -0.5397 | |
| 169 | P | A | -0.3213 | |
| 170 | N | A | 0.0103 | |
| 171 | F | A | 0.6182 | |
| 172 | F | A | 1.2442 | |
| 173 | L | A | 0.0000 | |
| 174 | L | A | 0.0000 | |
| 175 | E | A | -1.3728 | |
| 176 | R | A | -2.1796 | |
| 177 | L | A | 0.0000 | |
| 178 | R | A | -1.9798 | |
| 179 | K | A | -2.7686 | |
| 180 | A | A | -1.8132 | |
| 181 | Y | A | -1.4297 | |
| 182 | P | A | -1.5901 | |
| 183 | D | A | -2.2461 | |
| 184 | K | A | -1.4429 | |
| 185 | L | A | 0.0000 | |
| 186 | I | A | 0.0000 | |
| 187 | F | A | 0.0000 | |
| 188 | S | A | 0.0000 | |
| 189 | G | A | 0.0009 | |
| 190 | F | A | 0.0213 | |
| 191 | D | A | 0.0000 | |
| 192 | E | A | -0.9293 | |
| 193 | M | A | -0.2075 | |
| 194 | L | A | 0.0000 | |
| 195 | I | A | 0.0000 | |
| 196 | Q | A | 0.5520 | |
| 197 | A | A | 0.0000 | |
| 198 | V | A | 0.0000 | |
| 199 | I | A | 1.4046 | |
| 200 | S | A | 0.3460 | |
| 201 | G | A | -0.3101 | |
| 202 | V | A | 0.0000 | |
| 203 | D | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | A | A | 0.0000 | |
| 206 | I | A | 0.0000 | |
| 207 | G | A | 0.0000 | |
| 208 | S | A | 0.0747 | |
| 209 | T | A | 0.0000 | |
| 210 | Y | A | 0.0000 | |
| 211 | N | A | 0.0000 | |
| 212 | V | A | 0.0000 | |
| 213 | N | A | 0.0000 | |
| 214 | G | A | 0.0000 | |
| 215 | K | A | -2.7454 | |
| 216 | R | A | -1.7751 | |
| 217 | S | A | 0.0000 | |
| 218 | R | A | -2.1370 | |
| 219 | Q | A | -2.3224 | |
| 220 | I | A | 0.0000 | |
| 221 | F | A | -1.3703 | |
| 222 | E | A | -2.8734 | |
| 223 | L | A | -2.4533 | |
| 224 | A | A | 0.0000 | |
| 225 | Q | A | -2.2482 | |
| 226 | Q | A | -2.5591 | |
| 227 | G | A | -2.0493 | |
| 228 | K | A | -2.5775 | |
| 229 | V | A | -1.4905 | |
| 230 | D | A | -2.5746 | |
| 231 | E | A | -2.7998 | |
| 232 | A | A | 0.0000 | |
| 233 | Y | A | -1.2873 | |
| 234 | Q | A | -2.1910 | |
| 235 | V | A | -1.7150 | |
| 236 | Q | A | 0.0000 | |
| 237 | H | A | -1.9948 | |
| 238 | E | A | -2.1071 | |
| 239 | T | A | 0.0000 | |
| 240 | N | A | -1.9929 | |
| 241 | D | A | -2.2816 | |
| 242 | I | A | 0.0000 | |
| 243 | I | A | 0.0000 | |
| 244 | A | A | -0.8522 | |
| 245 | K | A | -1.1420 | |
| 246 | I | A | 0.0000 | |
| 247 | L | A | 0.4763 | |
| 248 | E | A | -1.3473 | |
| 249 | L | A | 0.0000 | |
| 250 | G | A | -0.1867 | |
| 251 | L | A | 0.4488 | |
| 252 | Y | A | 0.5861 | |
| 253 | P | A | 0.0969 | |
| 254 | T | A | 0.0000 | |
| 255 | L | A | 0.0000 | |
| 256 | K | A | 0.0000 | |
| 257 | E | A | 0.0000 | |
| 258 | I | A | 0.0000 | |
| 259 | L | A | 0.0000 | |
| 260 | K | A | -1.2137 | |
| 261 | Y | A | -0.3411 | |
| 262 | R | A | -0.9869 | |
| 263 | G | A | -1.1289 | |
| 264 | I | A | 0.0000 | |
| 265 | D | A | -2.1655 | |
| 266 | S | A | 0.0000 | |
| 267 | G | A | -0.9197 | |
| 268 | L | A | -0.9048 | |
| 269 | P | A | 0.0000 | |
| 270 | K | A | -1.5153 | |
| 271 | R | A | -2.0768 | |
| 272 | P | A | -0.9066 | |
| 273 | F | A | 0.0540 | |
| 274 | A | A | -0.2847 | |
| 275 | P | A | -0.9087 | |
| 276 | F | A | 0.0000 | |
| 277 | N | A | -2.7559 | |
| 278 | E | A | -3.4854 | |
| 279 | E | A | -3.3124 | |
| 280 | N | A | -2.6460 | |
| 281 | R | A | -2.4204 | |
| 282 | A | A | -1.5868 | |
| 283 | A | A | -1.5734 | |
| 284 | L | A | 0.0000 | |
| 285 | D | A | -2.1774 | |
| 286 | E | A | -3.2255 | |
| 287 | L | A | 0.0000 | |
| 288 | V | A | 0.0000 | |
| 289 | N | A | -3.2887 | |
| 290 | K | A | -3.3398 | |
| 291 | Y | A | 0.0000 | |
| 292 | N | A | -2.3311 | |
| 293 | L | A | -1.0570 |