| Chain sequence(s) |
A: LLACLFGNGRCSSNRDCCELTPVCKRGSCVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 2.3627 | |
| 2 | L | A | 2.4510 | |
| 3 | A | A | 1.1506 | |
| 4 | C | A | 1.3566 | |
| 5 | L | A | 1.9171 | |
| 6 | F | A | 1.0048 | |
| 7 | G | A | -0.2855 | |
| 8 | N | A | -1.5399 | |
| 9 | G | A | -1.6156 | |
| 10 | R | A | -2.8129 | |
| 11 | C | A | -2.2232 | |
| 12 | S | A | -1.8692 | |
| 13 | S | A | -2.2961 | |
| 14 | N | A | -2.6051 | |
| 15 | R | A | -2.7289 | |
| 16 | D | A | -1.7201 | |
| 17 | C | A | 0.0000 | |
| 18 | C | A | 0.0000 | |
| 19 | E | A | -0.7691 | |
| 20 | L | A | 0.6953 | |
| 21 | T | A | -0.4205 | |
| 22 | P | A | -1.0089 | |
| 23 | V | A | -1.3551 | |
| 24 | C | A | -2.4441 | |
| 25 | K | A | -3.0117 | |
| 26 | R | A | -3.0326 | |
| 27 | G | A | -2.6216 | |
| 28 | S | A | -2.4477 | |
| 29 | C | A | -1.5960 | |
| 30 | V | A | -0.1857 | |
| 31 | S | A | 0.1848 | |
| 32 | S | A | -0.1120 |