Project name: query_structure

Status: done

Started: 2026-03-16 23:50:17
Settings
Chain sequence(s) A: LLACLFGNGRCSSNRDCCELTPVCKRGSCVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:20)
Show buried residues

Minimal score value
-3.0326
Maximal score value
2.451
Average score
-0.8618
Total score value
-27.5786

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 2.3627
2 L A 2.4510
3 A A 1.1506
4 C A 1.3566
5 L A 1.9171
6 F A 1.0048
7 G A -0.2855
8 N A -1.5399
9 G A -1.6156
10 R A -2.8129
11 C A -2.2232
12 S A -1.8692
13 S A -2.2961
14 N A -2.6051
15 R A -2.7289
16 D A -1.7201
17 C A 0.0000
18 C A 0.0000
19 E A -0.7691
20 L A 0.6953
21 T A -0.4205
22 P A -1.0089
23 V A -1.3551
24 C A -2.4441
25 K A -3.0117
26 R A -3.0326
27 G A -2.6216
28 S A -2.4477
29 C A -1.5960
30 V A -0.1857
31 S A 0.1848
32 S A -0.1120
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Laboratory of Theory of Biopolymers 2018