| Chain sequence(s) |
A: MAQVQLVESGGGLVQAGGSLRVSCAASGRTYSDYAMGWFRQAPGKERDFVAGISGSGGDTYYADSVKGRFTISRDNAKNTMYLQMNSLKPEDTAVYFCAARTGTVLFTSRVDYRYWGQGTQVTV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:22)
[INFO] Main: Simulation completed successfully. (00:01:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5111 | |
| 2 | A | A | -0.6418 | |
| 3 | Q | A | -1.5687 | |
| 4 | V | A | -1.4933 | |
| 5 | Q | A | -1.4827 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 0.8383 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | -0.6149 | |
| 10 | G | A | -0.9910 | |
| 11 | G | A | -0.7728 | |
| 12 | G | A | 0.0621 | |
| 13 | L | A | 1.2426 | |
| 14 | V | A | 0.2930 | |
| 15 | Q | A | -0.9620 | |
| 16 | A | A | -1.2057 | |
| 17 | G | A | -1.2482 | |
| 18 | G | A | -0.7813 | |
| 19 | S | A | -1.1269 | |
| 20 | L | A | -0.8791 | |
| 21 | R | A | -1.9757 | |
| 22 | V | A | 0.0000 | |
| 23 | S | A | -0.3933 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.3375 | |
| 26 | A | A | -0.9292 | |
| 27 | S | A | -1.2708 | |
| 28 | G | A | -1.8676 | |
| 29 | R | A | -2.6252 | |
| 30 | T | A | -1.8016 | |
| 31 | Y | A | 0.0000 | |
| 32 | S | A | -1.7303 | |
| 33 | D | A | -2.3476 | |
| 34 | Y | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | M | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | -1.7406 | |
| 41 | Q | A | -2.3628 | |
| 42 | A | A | -2.1415 | |
| 43 | P | A | -1.3905 | |
| 44 | G | A | -1.9381 | |
| 45 | K | A | -3.4885 | |
| 46 | E | A | -3.7667 | |
| 47 | R | A | -3.3182 | |
| 48 | D | A | -3.1238 | |
| 49 | F | A | -1.4230 | |
| 50 | V | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | -0.5137 | |
| 55 | G | A | 0.0000 | |
| 56 | S | A | -1.2939 | |
| 57 | G | A | -1.5033 | |
| 58 | G | A | -1.5139 | |
| 59 | D | A | -1.5699 | |
| 60 | T | A | -0.5668 | |
| 61 | Y | A | 0.3260 | |
| 62 | Y | A | -0.4724 | |
| 63 | A | A | -1.3609 | |
| 64 | D | A | -2.3657 | |
| 65 | S | A | -1.8065 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.5385 | |
| 68 | G | A | -1.8038 | |
| 69 | R | A | -1.5164 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.7291 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.5115 | |
| 74 | R | A | -1.1493 | |
| 75 | D | A | -1.8441 | |
| 76 | N | A | -2.1857 | |
| 77 | A | A | -1.5799 | |
| 78 | K | A | -2.4651 | |
| 79 | N | A | -2.2726 | |
| 80 | T | A | -1.1789 | |
| 81 | M | A | 0.0000 | |
| 82 | Y | A | -0.5774 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.1425 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.4008 | |
| 87 | S | A | -1.2258 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -2.2268 | |
| 90 | P | A | -1.7595 | |
| 91 | E | A | -2.2906 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.7898 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | -0.4977 | |
| 96 | Y | A | 0.0000 | |
| 97 | F | A | 0.0000 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | R | A | 0.0000 | |
| 102 | T | A | -0.8199 | |
| 103 | G | A | -0.0853 | |
| 104 | T | A | 0.3852 | |
| 105 | V | A | 2.2180 | |
| 106 | L | A | 2.2102 | |
| 107 | F | A | 0.9716 | |
| 108 | T | A | 0.6174 | |
| 109 | S | A | -0.0724 | |
| 110 | R | A | -1.3531 | |
| 111 | V | A | 0.4300 | |
| 112 | D | A | -0.5184 | |
| 113 | Y | A | 0.0000 | |
| 114 | R | A | -1.6836 | |
| 115 | Y | A | -0.9409 | |
| 116 | W | A | -0.2604 | |
| 117 | G | A | -0.2150 | |
| 118 | Q | A | -0.9361 | |
| 119 | G | A | -0.6314 | |
| 120 | T | A | -0.7653 | |
| 121 | Q | A | -0.9694 | |
| 122 | V | A | 0.0000 | |
| 123 | T | A | 0.0043 | |
| 124 | V | A | -0.3134 |