Project name: query_structure

Status: done

Started: 2026-03-16 23:36:01
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Chain sequence(s) A: GSSVSSVPTKLEVVAATPTSLLISWDAPWAYSQSVAYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYGTPWGEGWYSWSPSSINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:28)
Show buried residues

Minimal score value
-2.3314
Maximal score value
1.7942
Average score
-0.2445
Total score value
-24.9419

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4202
2 S A -0.0647
3 S A 0.3223
4 V A 1.1615
5 S A 0.2173
6 S A 0.0056
7 V A 0.0505
8 P A 0.0000
9 T A -0.8069
10 K A -2.0959
11 L A 0.0000
12 E A -1.4901
13 V A 0.2531
14 V A 1.6235
15 A A 0.9337
16 A A 0.2922
17 T A -0.1951
18 P A -0.7967
19 T A -0.5289
20 S A -0.3140
21 L A 0.0000
22 L A 0.7822
23 I A 0.0000
24 S A -0.4794
25 W A 0.0000
26 D A -1.3746
27 A A -0.3522
28 P A 0.3817
29 W A 1.2120
30 A A 0.9420
31 Y A 0.9907
32 S A -0.0063
33 Q A -0.7971
34 S A -0.3025
35 V A 0.2885
36 A A 0.2354
37 Y A 0.2779
38 Y A 0.0000
39 R A -0.4887
40 I A 0.0000
41 T A 0.0000
42 Y A -0.2998
43 G A -0.6188
44 E A -1.3654
45 T A -1.2295
46 G A -1.2417
47 G A -1.4313
48 N A -1.5471
49 S A -0.8295
50 P A -0.2800
51 V A 0.4959
52 Q A -0.7279
53 E A -1.5613
54 F A -0.5624
55 T A -0.1933
56 V A 0.0640
57 P A -0.1880
58 G A -0.3001
59 S A -0.4653
60 S A -0.2848
61 S A -0.3789
62 T A -0.0952
63 A A 0.0000
64 T A 0.2528
65 I A 0.0000
66 S A -0.4716
67 G A -0.6848
68 L A 0.0000
69 S A -0.8382
70 P A -0.9825
71 G A -1.0783
72 V A -0.9104
73 D A -1.8468
74 Y A 0.0000
75 T A -0.8110
76 I A 0.0000
77 T A -0.4771
78 V A 0.0000
79 Y A 0.1800
80 A A 0.0000
81 Y A 1.0267
82 Y A 0.0000
83 G A 0.2694
84 T A 0.0000
85 P A -0.0924
86 W A 0.1962
87 G A -0.7839
88 E A -1.4778
89 G A -0.2314
90 W A 1.3452
91 Y A 1.7942
92 S A 1.1914
93 W A 1.1187
94 S A 0.0687
95 P A -0.0627
96 S A 0.0000
97 S A -0.6828
98 I A -0.7383
99 N A -1.6987
100 Y A -1.4250
101 R A -2.3314
102 T A -1.1765
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Laboratory of Theory of Biopolymers 2018