| Chain sequence(s) |
H: QAYLQQSGAELVRPGASVKMSCKTSGYTFTSYNMHWIKQTPRQGLEWIGAIYTGHGDTSYNQEFKGKATLTEDISSSTAYMQLSSLTSEDSAVYFCAREGVYDFDYALDYWGQGTSVTVSS
L: DIKMTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRAKRLVDGVPSRFSGSESGQDYSLTISSLEYEDMGIYYCLQYDEFPLTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:18)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -0.9774 | |
| 2 | A | H | 0.0000 | |
| 3 | Y | H | 0.4166 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.5032 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.9822 | |
| 8 | G | H | -0.7227 | |
| 9 | A | H | 0.1083 | |
| 11 | E | H | 0.3366 | |
| 12 | L | H | 1.0833 | |
| 13 | V | H | -0.1000 | |
| 14 | R | H | -1.7838 | |
| 15 | P | H | -1.4797 | |
| 16 | G | H | -1.1532 | |
| 17 | A | H | -0.9169 | |
| 18 | S | H | -0.9379 | |
| 19 | V | H | -0.6206 | |
| 20 | K | H | -1.2522 | |
| 21 | M | H | 0.0000 | |
| 22 | S | H | -0.7375 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.0835 | |
| 25 | T | H | 0.0000 | |
| 26 | S | H | -0.5102 | |
| 27 | G | H | -0.5274 | |
| 28 | Y | H | -0.1391 | |
| 29 | T | H | -0.1449 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.0498 | |
| 36 | S | H | -0.0163 | |
| 37 | Y | H | 0.0000 | |
| 38 | N | H | -0.3992 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.5379 | |
| 45 | T | H | 0.0000 | |
| 46 | P | H | -1.3802 | |
| 47 | R | H | -2.4626 | |
| 48 | Q | H | -1.7360 | |
| 49 | G | H | -1.0147 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6107 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | A | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.8885 | |
| 58 | T | H | 0.0000 | |
| 59 | G | H | -0.7851 | |
| 62 | H | H | -1.5963 | |
| 63 | G | H | -1.5697 | |
| 64 | D | H | -2.2616 | |
| 65 | T | H | -1.0128 | |
| 66 | S | H | -0.3190 | |
| 67 | Y | H | -0.5971 | |
| 68 | N | H | -1.4278 | |
| 69 | Q | H | -2.5906 | |
| 70 | E | H | -2.9863 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.7849 | |
| 74 | G | H | -1.8527 | |
| 75 | K | H | -1.5147 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7934 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.4378 | |
| 80 | E | H | -0.4179 | |
| 81 | D | H | 0.1061 | |
| 82 | I | H | 1.0706 | |
| 83 | S | H | 0.3682 | |
| 84 | S | H | -0.0151 | |
| 85 | S | H | 0.0930 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3715 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -1.0680 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.7816 | |
| 93 | S | H | -0.8298 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.1529 | |
| 96 | S | H | -1.2239 | |
| 97 | E | H | -1.6543 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.3445 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2886 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | E | H | 0.0000 | |
| 108 | G | H | 0.7422 | |
| 109 | V | H | 1.1795 | |
| 110 | Y | H | 1.2874 | |
| 111 | D | H | -0.0969 | |
| 112A | F | H | 1.7399 | |
| 112 | D | H | 0.0000 | |
| 113 | Y | H | 0.8468 | |
| 114 | A | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.4588 | |
| 117 | Y | H | 0.0975 | |
| 118 | W | H | -0.1726 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.6532 | |
| 121 | G | H | -1.0145 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | 0.0170 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0174 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6207 | |
| 128 | S | H | -0.7776 | |
| 1 | D | L | -2.1841 | |
| 2 | I | L | 0.0000 | |
| 3 | K | L | -2.3836 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.9069 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.4610 | |
| 8 | P | L | -0.4101 | |
| 9 | S | L | -0.4661 | |
| 10 | S | L | -0.2837 | |
| 11 | M | L | 0.2287 | |
| 12 | Y | L | 0.7105 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.7083 | |
| 15 | L | L | -0.3524 | |
| 16 | G | L | -1.1221 | |
| 17 | E | L | -2.0825 | |
| 18 | R | L | -2.3918 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6313 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5336 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -1.9048 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.0026 | |
| 27 | Q | L | -2.3122 | |
| 28 | D | L | -2.9206 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -2.0440 | |
| 37 | S | L | -1.5047 | |
| 38 | Y | L | -0.6373 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.9854 | |
| 45 | K | L | -1.4778 | |
| 46 | P | L | -1.1254 | |
| 47 | G | L | -1.5428 | |
| 48 | K | L | -2.5251 | |
| 49 | S | L | -1.5185 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.9671 | |
| 52 | T | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.3684 | |
| 56 | R | L | -0.7757 | |
| 57 | A | L | 0.0000 | |
| 65 | K | L | -2.1242 | |
| 66 | R | L | -1.4989 | |
| 67 | L | L | -0.6230 | |
| 68 | V | L | -0.9403 | |
| 69 | D | L | -1.8944 | |
| 70 | G | L | -1.1597 | |
| 71 | V | L | -0.6261 | |
| 72 | P | L | -0.4425 | |
| 74 | S | L | -0.4864 | |
| 75 | R | L | -0.7572 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.7472 | |
| 78 | G | L | -1.0993 | |
| 79 | S | L | -1.3649 | |
| 80 | E | L | -1.7302 | |
| 83 | S | L | -1.1234 | |
| 84 | G | L | -1.8425 | |
| 85 | Q | L | -2.2252 | |
| 86 | D | L | -1.8126 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.8056 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4676 | |
| 93 | S | L | -1.5967 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.0166 | |
| 96 | Y | L | 0.2004 | |
| 97 | E | L | -1.1846 | |
| 98 | D | L | 0.0000 | |
| 99 | M | L | -0.2426 | |
| 100 | G | L | 0.0000 | |
| 101 | I | L | -0.1200 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | D | L | -1.0046 | |
| 109 | E | L | -0.2644 | |
| 114 | F | L | 1.0202 | |
| 115 | P | L | -0.0209 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.5318 | |
| 118 | F | L | -0.1381 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.3416 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.6156 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.0580 | |
| 126 | L | L | -0.1090 | |
| 127 | K | L | -1.1971 |