Project name: 2D10D1

Status: done

Started: 2026-07-28 01:11:27
Settings
Chain sequence(s) H: QAYLQQSGAELVRPGASVKMSCKTSGYTFTSYNMHWIKQTPRQGLEWIGAIYTGHGDTSYNQEFKGKATLTEDISSSTAYMQLSSLTSEDSAVYFCAREGVYDFDYALDYWGQGTSVTVSS
L: DIKMTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRAKRLVDGVPSRFSGSESGQDYSLTISSLEYEDMGIYYCLQYDEFPLTFGAGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:19)
Show buried residues

Minimal score value
-2.9863
Maximal score value
1.7399
Average score
-0.5291
Total score value
-120.6358

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -0.9774
2 A H 0.0000
3 Y H 0.4166
4 L H 0.0000
5 Q H -1.5032
6 Q H 0.0000
7 S H -0.9822
8 G H -0.7227
9 A H 0.1083
11 E H 0.3366
12 L H 1.0833
13 V H -0.1000
14 R H -1.7838
15 P H -1.4797
16 G H -1.1532
17 A H -0.9169
18 S H -0.9379
19 V H -0.6206
20 K H -1.2522
21 M H 0.0000
22 S H -0.7375
23 C H 0.0000
24 K H -1.0835
25 T H 0.0000
26 S H -0.5102
27 G H -0.5274
28 Y H -0.1391
29 T H -0.1449
30 F H 0.0000
35 T H -0.0498
36 S H -0.0163
37 Y H 0.0000
38 N H -0.3992
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 I H 0.0000
43 K H 0.0000
44 Q H -0.5379
45 T H 0.0000
46 P H -1.3802
47 R H -2.4626
48 Q H -1.7360
49 G H -1.0147
50 L H 0.0000
51 E H -0.6107
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 A H 0.0000
56 I H 0.0000
57 Y H -0.8885
58 T H 0.0000
59 G H -0.7851
62 H H -1.5963
63 G H -1.5697
64 D H -2.2616
65 T H -1.0128
66 S H -0.3190
67 Y H -0.5971
68 N H -1.4278
69 Q H -2.5906
70 E H -2.9863
71 F H 0.0000
72 K H -2.7849
74 G H -1.8527
75 K H -1.5147
76 A H 0.0000
77 T H -0.7934
78 L H 0.0000
79 T H -0.4378
80 E H -0.4179
81 D H 0.1061
82 I H 1.0706
83 S H 0.3682
84 S H -0.0151
85 S H 0.0930
86 T H 0.0000
87 A H 0.0000
88 Y H -0.3715
89 M H 0.0000
90 Q H -1.0680
91 L H 0.0000
92 S H -0.7816
93 S H -0.8298
94 L H 0.0000
95 T H -1.1529
96 S H -1.2239
97 E H -1.6543
98 D H 0.0000
99 S H -0.3445
100 A H 0.0000
101 V H 0.2886
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 E H 0.0000
108 G H 0.7422
109 V H 1.1795
110 Y H 1.2874
111 D H -0.0969
112A F H 1.7399
112 D H 0.0000
113 Y H 0.8468
114 A H 0.0000
115 L H 0.0000
116 D H -0.4588
117 Y H 0.0975
118 W H -0.1726
119 G H 0.0000
120 Q H -1.6532
121 G H -1.0145
122 T H 0.0000
123 S H 0.0170
124 V H 0.0000
125 T H 0.0174
126 V H 0.0000
127 S H -0.6207
128 S H -0.7776
1 D L -2.1841
2 I L 0.0000
3 K L -2.3836
4 M L 0.0000
5 T L -0.9069
6 Q L 0.0000
7 S L -0.4610
8 P L -0.4101
9 S L -0.4661
10 S L -0.2837
11 M L 0.2287
12 Y L 0.7105
13 A L 0.0000
14 S L -0.7083
15 L L -0.3524
16 G L -1.1221
17 E L -2.0825
18 R L -2.3918
19 V L 0.0000
20 T L -0.6313
21 I L 0.0000
22 T L -0.5336
23 C L 0.0000
24 K L -1.9048
25 A L 0.0000
26 S L -2.0026
27 Q L -2.3122
28 D L -2.9206
29 I L 0.0000
36 N L -2.0440
37 S L -1.5047
38 Y L -0.6373
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 F L 0.0000
43 Q L 0.0000
44 Q L -0.9854
45 K L -1.4778
46 P L -1.1254
47 G L -1.5428
48 K L -2.5251
49 S L -1.5185
50 P L 0.0000
51 K L -0.9671
52 T L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.3684
56 R L -0.7757
57 A L 0.0000
65 K L -2.1242
66 R L -1.4989
67 L L -0.6230
68 V L -0.9403
69 D L -1.8944
70 G L -1.1597
71 V L -0.6261
72 P L -0.4425
74 S L -0.4864
75 R L -0.7572
76 F L 0.0000
77 S L -0.7472
78 G L -1.0993
79 S L -1.3649
80 E L -1.7302
83 S L -1.1234
84 G L -1.8425
85 Q L -2.2252
86 D L -1.8126
87 Y L 0.0000
88 S L -0.8056
89 L L 0.0000
90 T L 0.0000
91 I L 0.0000
92 S L -1.4676
93 S L -1.5967
94 L L 0.0000
95 E L -1.0166
96 Y L 0.2004
97 E L -1.1846
98 D L 0.0000
99 M L -0.2426
100 G L 0.0000
101 I L -0.1200
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 D L -1.0046
109 E L -0.2644
114 F L 1.0202
115 P L -0.0209
116 L L 0.0000
117 T L -0.5318
118 F L -0.1381
119 G L 0.0000
120 A L -0.3416
121 G L 0.0000
122 T L 0.0000
123 K L -0.6156
124 L L 0.0000
125 E L -0.0580
126 L L -0.1090
127 K L -1.1971
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Laboratory of Theory of Biopolymers 2018