Project name: Hb17

Status: done

Started: 2025-06-23 05:07:27
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Chain sequence(s) A: QRVEQTPTTTTKEAGESLTINCVLKGSSCASFSTYWYFTKKGATKKASLSTGGRYSDTKNKASKSFSLRISDLRVEDSGTYHCEAYSFRIYSWEAGDCSGSYEGGGTILTVK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:30)
Show buried residues

Minimal score value
-3.3272
Maximal score value
1.669
Average score
-0.9084
Total score value
-101.7414

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -2.2960
2 R A -3.0942
3 V A 0.0000
4 E A -2.0204
5 Q A 0.0000
6 T A -0.4890
7 P A -0.3014
8 T A -0.1182
9 T A 0.1990
10 T A 0.0080
11 T A -0.8888
12 K A -2.1315
13 E A -3.3272
14 A A -2.6661
15 G A -2.6917
16 E A -2.8845
17 S A -2.0754
18 L A 0.0000
19 T A -0.8203
20 I A 0.0000
21 N A -1.1066
22 C A 0.0000
23 V A -1.2385
24 L A 0.0000
25 K A -2.2736
26 G A -1.6944
27 S A 0.0000
28 S A -0.9430
29 C A 0.0000
30 A A -0.0080
31 S A 0.0000
32 F A 0.0000
33 S A -0.1784
34 T A -0.2028
35 Y A 0.2559
36 W A 0.0000
37 Y A -0.2875
38 F A 0.0000
39 T A -2.0233
40 K A -2.9404
41 K A -2.8386
42 G A -1.8355
43 A A -1.9625
44 T A -1.8367
45 K A -2.8681
46 K A -2.4713
47 A A -1.2887
48 S A -0.2996
49 L A -0.0531
50 S A -0.2840
51 T A -0.6878
52 G A -0.9039
53 G A -0.8824
54 R A -1.3673
55 Y A -1.1475
56 S A -1.1535
57 D A -1.3913
58 T A -1.8522
59 K A -2.9551
60 N A -2.9526
61 K A -2.8853
62 A A -1.5425
63 S A -1.5179
64 K A -1.9003
65 S A -1.7672
66 F A 0.0000
67 S A -1.2859
68 L A 0.0000
69 R A -1.5984
70 I A 0.0000
71 S A -2.0099
72 D A -3.0174
73 L A 0.0000
74 R A -2.4264
75 V A -0.5228
76 E A -1.8718
77 D A 0.0000
78 S A -1.3303
79 G A 0.0000
80 T A -0.6294
81 Y A 0.0000
82 H A -0.5267
83 C A 0.0000
84 E A -0.8118
85 A A 0.0000
86 Y A 0.3863
87 S A 0.0000
88 F A 0.1757
89 R A -0.0180
90 I A 1.5990
91 Y A 1.6690
92 S A 0.9520
93 W A 1.3256
94 E A 0.3002
95 A A -0.3730
96 G A -1.3624
97 D A -2.1942
98 C A 0.0000
99 S A -0.6833
100 G A -0.5698
101 S A -0.4949
102 Y A -1.4108
103 E A -1.9068
104 G A 0.0000
105 G A -1.1732
106 G A 0.0000
107 T A 0.0000
108 I A 0.3708
109 L A 0.0000
110 T A -0.9339
111 V A 0.0000
112 K A -2.4857
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Laboratory of Theory of Biopolymers 2018