Chain sequence(s) |
A: AIITVTPKSFGSPGSLGKLLCEVTPVSGQERFVWSSLDTPSQRSFSGPWLEAQEAQLLSQPWQCQLYQGERLLGAAVYFTEL
H: QVQLVQSGAEVKKPGASVKVSCKASGFTLTNYGMNWVRQARGQRLEWIGWINTDTGEPTYADDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARNPPYYYGVNNAEAMDYWGQGTTVTVSS L: DIQMTQSPSSLSASVGDRVTITCSSSQDISNYLNWYLQKPGQSPQLLIYYTSTLHLGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYYNLPWTFGQGTKVEIK input PDB |
Selected Chain(s) | A,H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:35) [INFO] Main: Simulation completed successfully. (00:03:38) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | 0.3903 | |
2 | I | A | 0.6442 | |
3 | I | A | 0.1278 | |
4 | T | A | -0.1300 | |
5 | V | A | -0.1214 | |
6 | T | A | -0.5690 | |
7 | P | A | -1.1434 | |
8 | K | A | -1.7147 | |
9 | S | A | -0.7092 | |
10 | F | A | 0.8388 | |
11 | G | A | -0.0433 | |
12 | S | A | -0.1366 | |
13 | P | A | -0.3521 | |
14 | G | A | -0.8586 | |
15 | S | A | -0.9878 | |
16 | L | A | -0.3315 | |
17 | G | A | 0.0000 | |
18 | K | A | -0.8483 | |
19 | L | A | 0.0000 | |
20 | L | A | -0.6428 | |
21 | C | A | 0.0000 | |
22 | E | A | -1.2036 | |
23 | V | A | -0.0471 | |
24 | T | A | 0.2194 | |
25 | P | A | 0.5006 | |
26 | V | A | 1.0762 | |
27 | S | A | -0.0366 | |
28 | G | A | -0.8719 | |
29 | Q | A | -1.6701 | |
30 | E | A | -1.4535 | |
31 | R | A | -1.9351 | |
32 | F | A | -0.4584 | |
33 | V | A | -0.2266 | |
34 | W | A | 0.0000 | |
35 | S | A | -0.3419 | |
36 | S | A | 0.0000 | |
37 | L | A | 0.0945 | |
38 | D | A | -1.6030 | |
39 | T | A | -0.9336 | |
40 | P | A | -0.6886 | |
41 | S | A | -0.3039 | |
42 | Q | A | -0.4018 | |
43 | R | A | 0.0000 | |
44 | S | A | -0.3017 | |
45 | F | A | 0.0000 | |
46 | S | A | -0.3043 | |
47 | G | A | -0.2981 | |
48 | P | A | -0.3728 | |
49 | W | A | -0.0377 | |
50 | L | A | 0.0000 | |
51 | E | A | -0.6527 | |
52 | A | A | -1.2051 | |
53 | Q | A | 0.0000 | |
54 | E | A | -2.0195 | |
55 | A | A | -1.0502 | |
56 | Q | A | -0.6883 | |
57 | L | A | -0.0140 | |
58 | L | A | 1.1369 | |
59 | S | A | 0.1921 | |
60 | Q | A | -0.2540 | |
61 | P | A | 0.0000 | |
62 | W | A | 0.0000 | |
63 | Q | A | 0.3767 | |
64 | C | A | 0.0000 | |
65 | Q | A | 0.1284 | |
66 | L | A | 0.0000 | |
67 | Y | A | -0.9227 | |
68 | Q | A | -1.5474 | |
69 | G | A | -2.0094 | |
70 | E | A | -2.8650 | |
71 | R | A | -2.1208 | |
72 | L | A | 0.1264 | |
73 | L | A | 0.8223 | |
74 | G | A | 0.4659 | |
75 | A | A | 0.5264 | |
76 | A | A | 0.5000 | |
77 | V | A | 1.3088 | |
78 | Y | A | 1.4676 | |
79 | F | A | 2.0691 | |
80 | T | A | 0.9983 | |
81 | E | A | -0.5157 | |
82 | L | A | 1.1070 | |
83 | Q | H | -1.4594 | |
84 | V | H | -0.7698 | |
85 | Q | H | -1.2664 | |
86 | L | H | 0.0000 | |
87 | V | H | 0.3536 | |
88 | Q | H | 0.0000 | |
89 | S | H | -0.5136 | |
90 | G | H | -0.5695 | |
91 | A | H | 0.0188 | |
92 | E | H | 0.1097 | |
93 | V | H | 0.9800 | |
94 | K | H | -0.8645 | |
95 | K | H | -2.0931 | |
96 | P | H | -1.8789 | |
97 | G | H | -1.4764 | |
98 | A | H | -1.1885 | |
99 | S | H | -1.2538 | |
100 | V | H | -0.8461 | |
101 | K | H | -1.7668 | |
102 | V | H | 0.0000 | |
103 | S | H | -0.4363 | |
104 | C | H | 0.0000 | |
105 | K | H | -0.5992 | |
106 | A | H | -0.3516 | |
107 | S | H | -0.7485 | |
108 | G | H | -0.9922 | |
109 | F | H | -0.2829 | |
110 | T | H | 0.0171 | |
111 | L | H | 0.0000 | |
112 | T | H | -0.4845 | |
113 | N | H | -0.7588 | |
114 | Y | H | 0.2805 | |
115 | G | H | 0.0000 | |
116 | M | H | 0.0000 | |
117 | N | H | 0.0000 | |
118 | W | H | 0.0000 | |
119 | V | H | 0.0000 | |
120 | R | H | -0.4111 | |
121 | Q | H | -0.9252 | |
122 | A | H | -1.5728 | |
123 | R | H | -2.3605 | |
124 | G | H | -1.9336 | |
125 | Q | H | -1.6028 | |
126 | R | H | -1.0041 | |
127 | L | H | 0.0000 | |
128 | E | H | -0.5881 | |
129 | W | H | 0.0000 | |
130 | I | H | 0.0000 | |
131 | G | H | 0.0000 | |
132 | W | H | 0.0000 | |
133 | I | H | 0.0000 | |
134 | N | H | 0.0000 | |
135 | T | H | -1.1243 | |
136 | D | H | -2.1296 | |
137 | T | H | -1.2124 | |
138 | G | H | -1.6346 | |
139 | E | H | -2.4373 | |
140 | P | H | -0.8577 | |
141 | T | H | 0.0000 | |
142 | Y | H | -0.8495 | |
143 | A | H | 0.0000 | |
144 | D | H | -3.1240 | |
145 | D | H | -3.0690 | |
146 | F | H | 0.0000 | |
147 | K | H | -2.1526 | |
148 | G | H | -1.5194 | |
149 | R | H | -1.2778 | |
150 | F | H | 0.0000 | |
151 | V | H | -0.1095 | |
152 | F | H | 0.0000 | |
153 | S | H | -0.0550 | |
154 | L | H | 0.1808 | |
155 | D | H | -0.6413 | |
156 | T | H | -0.3068 | |
157 | S | H | 0.0150 | |
158 | V | H | 0.5457 | |
159 | S | H | -0.1531 | |
160 | T | H | 0.0000 | |
161 | A | H | 0.0000 | |
162 | Y | H | -0.3454 | |
163 | L | H | 0.0000 | |
164 | Q | H | -1.0548 | |
165 | I | H | 0.0000 | |
166 | S | H | -0.9489 | |
167 | S | H | -1.0830 | |
168 | L | H | 0.0000 | |
169 | K | H | -2.4772 | |
170 | A | H | -1.8641 | |
171 | E | H | -2.2502 | |
172 | D | H | 0.0000 | |
173 | T | H | -0.9595 | |
174 | A | H | 0.0000 | |
175 | V | H | -0.2425 | |
176 | Y | H | 0.0000 | |
177 | Y | H | 0.0000 | |
178 | C | H | 0.0000 | |
179 | A | H | 0.0000 | |
180 | R | H | 0.0000 | |
181 | N | H | -0.2536 | |
182 | P | H | 0.2577 | |
183 | P | H | 0.7731 | |
184 | Y | H | 1.9300 | |
185 | Y | H | 2.1835 | |
186 | Y | H | 1.5993 | |
187 | G | H | 0.6951 | |
188 | V | H | -0.2449 | |
189 | N | H | 0.0000 | |
190 | N | H | -0.6682 | |
191 | A | H | 0.0000 | |
192 | E | H | -1.7768 | |
193 | A | H | -0.8571 | |
194 | M | H | 0.0000 | |
195 | D | H | -0.4127 | |
196 | Y | H | -0.1527 | |
197 | W | H | 0.0000 | |
198 | G | H | 0.0000 | |
199 | Q | H | -1.4317 | |
200 | G | H | -0.7244 | |
201 | T | H | 0.0000 | |
202 | T | H | 0.0206 | |
203 | V | H | 0.0000 | |
204 | T | H | -0.2864 | |
205 | V | H | 0.0000 | |
206 | S | H | -0.8337 | |
207 | S | H | -0.8373 | |
208 | D | L | -1.6539 | |
209 | I | L | -0.2331 | |
210 | Q | L | -0.9487 | |
211 | M | L | -0.1727 | |
212 | T | L | 0.0000 | |
213 | Q | L | 0.0000 | |
214 | S | L | -0.3740 | |
215 | P | L | -0.6012 | |
216 | S | L | -0.7835 | |
217 | S | L | -0.9483 | |
218 | L | L | -0.6554 | |
219 | S | L | -1.0675 | |
220 | A | L | 0.0000 | |
221 | S | L | -1.0619 | |
222 | V | L | -0.2854 | |
223 | G | L | -1.0544 | |
224 | D | L | -2.1108 | |
225 | R | L | -2.4610 | |
226 | V | L | 0.0000 | |
227 | T | L | -0.5032 | |
228 | I | L | 0.0000 | |
229 | T | L | -0.5426 | |
230 | C | L | 0.0000 | |
231 | S | L | -1.3627 | |
232 | S | L | -1.4644 | |
233 | S | L | -1.1006 | |
234 | Q | L | -1.5889 | |
235 | D | L | -2.4891 | |
236 | I | L | -0.6798 | |
237 | S | L | -1.0718 | |
238 | N | L | -0.6768 | |
239 | Y | L | 0.4573 | |
240 | L | L | 0.0000 | |
241 | N | L | 0.0000 | |
242 | W | L | 0.0000 | |
243 | Y | L | 0.0000 | |
244 | L | L | -0.3593 | |
245 | Q | L | -0.8920 | |
246 | K | L | -1.3187 | |
247 | P | L | -0.9725 | |
248 | G | L | -1.3942 | |
249 | Q | L | -1.9950 | |
250 | S | L | -1.3892 | |
251 | P | L | 0.0000 | |
252 | Q | L | -1.1866 | |
253 | L | L | 0.0000 | |
254 | L | L | 0.0000 | |
255 | I | L | 0.0000 | |
256 | Y | L | 0.7380 | |
257 | Y | L | 0.8180 | |
258 | T | L | 0.0000 | |
259 | S | L | -0.0557 | |
260 | T | L | 0.4979 | |
261 | L | L | 0.8228 | |
262 | H | L | 0.6174 | |
263 | L | L | 1.4156 | |
264 | G | L | 0.4178 | |
265 | V | L | 0.4128 | |
266 | P | L | -0.1504 | |
267 | S | L | -0.4666 | |
268 | R | L | -0.9885 | |
269 | F | L | 0.0000 | |
270 | S | L | -0.3756 | |
271 | G | L | -0.1684 | |
272 | S | L | -0.7840 | |
273 | G | L | -1.2346 | |
274 | S | L | -1.3437 | |
275 | G | L | -1.6073 | |
276 | T | L | -2.0069 | |
277 | E | L | -2.4757 | |
278 | F | L | 0.0000 | |
279 | T | L | -0.6755 | |
280 | L | L | 0.0000 | |
281 | T | L | -0.6570 | |
282 | I | L | 0.0000 | |
283 | S | L | -1.6060 | |
284 | S | L | -1.4798 | |
285 | L | L | 0.0000 | |
286 | Q | L | -1.0912 | |
287 | P | L | -0.9762 | |
288 | D | L | -1.6208 | |
289 | D | L | 0.0000 | |
290 | F | L | -0.2573 | |
291 | A | L | 0.0000 | |
292 | T | L | -0.6737 | |
293 | Y | L | 0.0000 | |
294 | Y | L | 0.0000 | |
295 | C | L | 0.0000 | |
296 | Q | L | 0.0000 | |
297 | Q | L | 0.0000 | |
298 | Y | L | 0.0000 | |
299 | Y | L | 0.2268 | |
300 | N | L | -0.4145 | |
301 | L | L | 0.0000 | |
302 | P | L | -0.5332 | |
303 | W | L | 0.0000 | |
304 | T | L | 0.1100 | |
305 | F | L | 0.0000 | |
306 | G | L | 0.0000 | |
307 | Q | L | -0.8256 | |
308 | G | L | 0.0000 | |
309 | T | L | 0.0000 | |
310 | K | L | -1.5228 | |
311 | V | L | 0.0000 | |
312 | E | L | -1.8012 | |
313 | I | L | -0.9221 | |
314 | K | L | -1.7321 |