Project name: cf1c9d0c8c1bf77

Status: done

Started: 2025-08-10 19:07:45
Settings
Chain sequence(s) A: AIITVTPKSFGSPGSLGKLLCEVTPVSGQERFVWSSLDTPSQRSFSGPWLEAQEAQLLSQPWQCQLYQGERLLGAAVYFTEL
H: QVQLVQSGAEVKKPGASVKVSCKASGFTLTNYGMNWVRQARGQRLEWIGWINTDTGEPTYADDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARNPPYYYGVNNAEAMDYWGQGTTVTVSS
L: DIQMTQSPSSLSASVGDRVTITCSSSQDISNYLNWYLQKPGQSPQLLIYYTSTLHLGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYYNLPWTFGQGTKVEIK
input PDB
Selected Chain(s) A,H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:38)
Show buried residues

Minimal score value
-3.124
Maximal score value
2.1835
Average score
-0.4571
Total score value
-143.5348

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.3903
2 I A 0.6442
3 I A 0.1278
4 T A -0.1300
5 V A -0.1214
6 T A -0.5690
7 P A -1.1434
8 K A -1.7147
9 S A -0.7092
10 F A 0.8388
11 G A -0.0433
12 S A -0.1366
13 P A -0.3521
14 G A -0.8586
15 S A -0.9878
16 L A -0.3315
17 G A 0.0000
18 K A -0.8483
19 L A 0.0000
20 L A -0.6428
21 C A 0.0000
22 E A -1.2036
23 V A -0.0471
24 T A 0.2194
25 P A 0.5006
26 V A 1.0762
27 S A -0.0366
28 G A -0.8719
29 Q A -1.6701
30 E A -1.4535
31 R A -1.9351
32 F A -0.4584
33 V A -0.2266
34 W A 0.0000
35 S A -0.3419
36 S A 0.0000
37 L A 0.0945
38 D A -1.6030
39 T A -0.9336
40 P A -0.6886
41 S A -0.3039
42 Q A -0.4018
43 R A 0.0000
44 S A -0.3017
45 F A 0.0000
46 S A -0.3043
47 G A -0.2981
48 P A -0.3728
49 W A -0.0377
50 L A 0.0000
51 E A -0.6527
52 A A -1.2051
53 Q A 0.0000
54 E A -2.0195
55 A A -1.0502
56 Q A -0.6883
57 L A -0.0140
58 L A 1.1369
59 S A 0.1921
60 Q A -0.2540
61 P A 0.0000
62 W A 0.0000
63 Q A 0.3767
64 C A 0.0000
65 Q A 0.1284
66 L A 0.0000
67 Y A -0.9227
68 Q A -1.5474
69 G A -2.0094
70 E A -2.8650
71 R A -2.1208
72 L A 0.1264
73 L A 0.8223
74 G A 0.4659
75 A A 0.5264
76 A A 0.5000
77 V A 1.3088
78 Y A 1.4676
79 F A 2.0691
80 T A 0.9983
81 E A -0.5157
82 L A 1.1070
83 Q H -1.4594
84 V H -0.7698
85 Q H -1.2664
86 L H 0.0000
87 V H 0.3536
88 Q H 0.0000
89 S H -0.5136
90 G H -0.5695
91 A H 0.0188
92 E H 0.1097
93 V H 0.9800
94 K H -0.8645
95 K H -2.0931
96 P H -1.8789
97 G H -1.4764
98 A H -1.1885
99 S H -1.2538
100 V H -0.8461
101 K H -1.7668
102 V H 0.0000
103 S H -0.4363
104 C H 0.0000
105 K H -0.5992
106 A H -0.3516
107 S H -0.7485
108 G H -0.9922
109 F H -0.2829
110 T H 0.0171
111 L H 0.0000
112 T H -0.4845
113 N H -0.7588
114 Y H 0.2805
115 G H 0.0000
116 M H 0.0000
117 N H 0.0000
118 W H 0.0000
119 V H 0.0000
120 R H -0.4111
121 Q H -0.9252
122 A H -1.5728
123 R H -2.3605
124 G H -1.9336
125 Q H -1.6028
126 R H -1.0041
127 L H 0.0000
128 E H -0.5881
129 W H 0.0000
130 I H 0.0000
131 G H 0.0000
132 W H 0.0000
133 I H 0.0000
134 N H 0.0000
135 T H -1.1243
136 D H -2.1296
137 T H -1.2124
138 G H -1.6346
139 E H -2.4373
140 P H -0.8577
141 T H 0.0000
142 Y H -0.8495
143 A H 0.0000
144 D H -3.1240
145 D H -3.0690
146 F H 0.0000
147 K H -2.1526
148 G H -1.5194
149 R H -1.2778
150 F H 0.0000
151 V H -0.1095
152 F H 0.0000
153 S H -0.0550
154 L H 0.1808
155 D H -0.6413
156 T H -0.3068
157 S H 0.0150
158 V H 0.5457
159 S H -0.1531
160 T H 0.0000
161 A H 0.0000
162 Y H -0.3454
163 L H 0.0000
164 Q H -1.0548
165 I H 0.0000
166 S H -0.9489
167 S H -1.0830
168 L H 0.0000
169 K H -2.4772
170 A H -1.8641
171 E H -2.2502
172 D H 0.0000
173 T H -0.9595
174 A H 0.0000
175 V H -0.2425
176 Y H 0.0000
177 Y H 0.0000
178 C H 0.0000
179 A H 0.0000
180 R H 0.0000
181 N H -0.2536
182 P H 0.2577
183 P H 0.7731
184 Y H 1.9300
185 Y H 2.1835
186 Y H 1.5993
187 G H 0.6951
188 V H -0.2449
189 N H 0.0000
190 N H -0.6682
191 A H 0.0000
192 E H -1.7768
193 A H -0.8571
194 M H 0.0000
195 D H -0.4127
196 Y H -0.1527
197 W H 0.0000
198 G H 0.0000
199 Q H -1.4317
200 G H -0.7244
201 T H 0.0000
202 T H 0.0206
203 V H 0.0000
204 T H -0.2864
205 V H 0.0000
206 S H -0.8337
207 S H -0.8373
208 D L -1.6539
209 I L -0.2331
210 Q L -0.9487
211 M L -0.1727
212 T L 0.0000
213 Q L 0.0000
214 S L -0.3740
215 P L -0.6012
216 S L -0.7835
217 S L -0.9483
218 L L -0.6554
219 S L -1.0675
220 A L 0.0000
221 S L -1.0619
222 V L -0.2854
223 G L -1.0544
224 D L -2.1108
225 R L -2.4610
226 V L 0.0000
227 T L -0.5032
228 I L 0.0000
229 T L -0.5426
230 C L 0.0000
231 S L -1.3627
232 S L -1.4644
233 S L -1.1006
234 Q L -1.5889
235 D L -2.4891
236 I L -0.6798
237 S L -1.0718
238 N L -0.6768
239 Y L 0.4573
240 L L 0.0000
241 N L 0.0000
242 W L 0.0000
243 Y L 0.0000
244 L L -0.3593
245 Q L -0.8920
246 K L -1.3187
247 P L -0.9725
248 G L -1.3942
249 Q L -1.9950
250 S L -1.3892
251 P L 0.0000
252 Q L -1.1866
253 L L 0.0000
254 L L 0.0000
255 I L 0.0000
256 Y L 0.7380
257 Y L 0.8180
258 T L 0.0000
259 S L -0.0557
260 T L 0.4979
261 L L 0.8228
262 H L 0.6174
263 L L 1.4156
264 G L 0.4178
265 V L 0.4128
266 P L -0.1504
267 S L -0.4666
268 R L -0.9885
269 F L 0.0000
270 S L -0.3756
271 G L -0.1684
272 S L -0.7840
273 G L -1.2346
274 S L -1.3437
275 G L -1.6073
276 T L -2.0069
277 E L -2.4757
278 F L 0.0000
279 T L -0.6755
280 L L 0.0000
281 T L -0.6570
282 I L 0.0000
283 S L -1.6060
284 S L -1.4798
285 L L 0.0000
286 Q L -1.0912
287 P L -0.9762
288 D L -1.6208
289 D L 0.0000
290 F L -0.2573
291 A L 0.0000
292 T L -0.6737
293 Y L 0.0000
294 Y L 0.0000
295 C L 0.0000
296 Q L 0.0000
297 Q L 0.0000
298 Y L 0.0000
299 Y L 0.2268
300 N L -0.4145
301 L L 0.0000
302 P L -0.5332
303 W L 0.0000
304 T L 0.1100
305 F L 0.0000
306 G L 0.0000
307 Q L -0.8256
308 G L 0.0000
309 T L 0.0000
310 K L -1.5228
311 V L 0.0000
312 E L -1.8012
313 I L -0.9221
314 K L -1.7321
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Laboratory of Theory of Biopolymers 2018