| Chain sequence(s) |
L: KTSFSIAPVFGFKKD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 110 | K | L | -1.9473 | |
| 111 | T | L | -0.4197 | |
| 112 | S | L | 0.1252 | |
| 113 | F | L | 1.8938 | |
| 114 | S | L | 0.6597 | |
| 115 | I | L | 2.0050 | |
| 116 | A | L | 0.3229 | |
| 117 | P | L | -0.0002 | |
| 118 | V | L | 2.0824 | |
| 119 | F | L | 2.1820 | |
| 120 | G | L | 0.1989 | |
| 121 | F | L | 1.5409 | |
| 122 | K | L | -1.5620 | |
| 123 | K | L | -1.8567 | |
| 124 | D | L | -2.2337 |