Project name: cf356c386399e96

Status: done

Started: 2025-08-12 13:40:48
Settings
Chain sequence(s) A: MQVQLVESGGGSVQAGGSLRLSCTASGTKELKYAAFDLGWFRQAPGQEREAVAAIDRDGGITYYADSVKGRFTISRDNAKNTVTLQMNNLKPVDTAIYYCAARRSRNRTYESWGQGTQVTVSGGGGSHHHHHHLEYPYDVPDYA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:30)
Show buried residues

Minimal score value
-3.7447
Maximal score value
1.3119
Average score
-0.95
Total score value
-136.7968

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.0394
2 Q A -1.4428
3 V A 0.0000
4 Q A -1.1693
5 L A 0.0000
6 V A 1.1286
7 E A 0.1221
8 S A -0.5658
9 G A -1.3297
10 G A -1.2587
11 G A -0.9541
12 S A -0.7639
13 V A -0.9512
14 Q A -2.0151
15 A A -1.8011
16 G A -2.0336
17 G A -1.5621
18 S A -1.8470
19 L A -1.6166
20 R A -2.3999
21 L A 0.0000
22 S A -0.5628
23 C A 0.0000
24 T A -0.1757
25 A A 0.0000
26 S A -0.8548
27 G A -1.0204
28 T A -0.7410
29 K A -1.2047
30 E A -0.7745
31 L A -0.2053
32 K A -1.5577
33 Y A 0.0000
34 A A -1.4247
35 A A -1.4746
36 F A 0.0000
37 D A -1.4025
38 L A 0.0000
39 G A 0.0000
40 W A 0.0000
41 F A -0.2592
42 R A 0.0000
43 Q A -2.0192
44 A A -1.2920
45 P A -1.2568
46 G A -1.7693
47 Q A -2.9915
48 E A -3.7447
49 R A -3.0581
50 E A -2.2630
51 A A -0.8372
52 V A 0.0000
53 A A 0.0000
54 A A 0.6176
55 I A 0.0000
56 D A 0.0000
57 R A -2.0097
58 D A -2.4769
59 G A -1.4643
60 G A -0.6128
61 I A 0.9054
62 T A 1.0899
63 Y A 1.3119
64 Y A -0.1862
65 A A -1.0876
66 D A -2.3325
67 S A -1.3387
68 V A 0.0000
69 K A -2.4426
70 G A -1.9671
71 R A -2.0620
72 F A 0.0000
73 T A -0.9159
74 I A 0.0000
75 S A -0.5234
76 R A -1.5758
77 D A -1.9988
78 N A -2.4786
79 A A -1.3583
80 K A -2.1416
81 N A -1.5849
82 T A -0.9986
83 V A 0.0000
84 T A -0.8506
85 L A 0.0000
86 Q A -1.7117
87 M A 0.0000
88 N A -2.5400
89 N A -2.4857
90 L A 0.0000
91 K A -1.6287
92 P A -0.3184
93 V A 1.2333
94 D A 0.0000
95 T A 0.0155
96 A A 0.0000
97 I A -0.4108
98 Y A 0.0000
99 Y A -0.1416
100 C A 0.0000
101 A A 0.0000
102 A A 0.0000
103 R A -2.3149
104 R A -2.8525
105 S A -2.2551
106 R A -3.0146
107 N A -3.1354
108 R A -3.0590
109 T A -2.0670
110 Y A -1.6087
111 E A -2.3986
112 S A -1.3538
113 W A -0.2649
114 G A -0.1429
115 Q A -0.9554
116 G A -0.5010
117 T A 0.0000
118 Q A -1.4074
119 V A 0.0000
120 T A -0.6218
121 V A 0.0000
122 S A -1.2190
123 G A -1.6479
124 G A -1.4603
125 G A -1.3538
126 G A -1.3632
127 S A -1.5755
128 H A -2.1370
129 H A -2.5102
130 H A -2.7265
131 H A -2.4802
132 H A -2.2385
133 H A -1.4673
134 L A 0.0586
135 E A -0.6884
136 Y A 0.7231
137 P A 0.3880
138 Y A 0.8018
139 D A -0.5920
140 V A 0.7976
141 P A -0.1879
142 D A -1.0148
143 Y A 0.5914
144 A A 0.2389
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Laboratory of Theory of Biopolymers 2018