| Chain sequence(s) |
A: MGSHHHHHHMQKKNQIAAAIVLRGLAKDGKFANTEAAAKMKKSDKIAAAIVLRGLAKDGKFAAAEAAAKMKKDDQIAAAIALRGMAKDGKFAVKEAAAKQNKNDQIAAAIVLRGLAKGGKFANAEAAAKKKKNDQIAAALVLRGVAKSGKFAGAEAAAKITRNDEIAAAIVLRGMAKGGRFFASGGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:46)
[INFO] Main: Simulation completed successfully. (00:05:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6567 | |
| 2 | G | A | -0.9332 | |
| 3 | S | A | -0.9835 | |
| 4 | H | A | -1.7945 | |
| 5 | H | A | -2.2248 | |
| 6 | H | A | -2.1791 | |
| 7 | H | A | -2.5754 | |
| 8 | H | A | -2.6224 | |
| 9 | H | A | -2.9678 | |
| 10 | M | A | -2.2917 | |
| 11 | Q | A | -2.6598 | |
| 12 | K | A | -2.9587 | |
| 13 | K | A | -2.4785 | |
| 14 | N | A | -2.3069 | |
| 15 | Q | A | -1.9636 | |
| 16 | I | A | 0.0000 | |
| 17 | A | A | -0.1788 | |
| 18 | A | A | -0.1100 | |
| 19 | A | A | 0.0000 | |
| 20 | I | A | 0.7549 | |
| 21 | V | A | 1.5318 | |
| 22 | L | A | 1.7856 | |
| 23 | R | A | 0.0000 | |
| 24 | G | A | 0.0000 | |
| 25 | L | A | 1.2507 | |
| 26 | A | A | -0.0071 | |
| 27 | K | A | -1.5802 | |
| 28 | D | A | -1.8422 | |
| 29 | G | A | -2.0455 | |
| 30 | K | A | -2.1541 | |
| 31 | F | A | 0.0000 | |
| 32 | A | A | -1.3283 | |
| 33 | N | A | -1.4062 | |
| 34 | T | A | -1.7735 | |
| 35 | E | A | -2.6872 | |
| 36 | A | A | -1.9474 | |
| 37 | A | A | 0.0000 | |
| 38 | A | A | -2.1774 | |
| 39 | K | A | -2.7667 | |
| 40 | M | A | 0.0000 | |
| 41 | K | A | -3.1513 | |
| 42 | K | A | -2.7811 | |
| 43 | S | A | -1.5482 | |
| 44 | D | A | -1.7349 | |
| 45 | K | A | -1.0357 | |
| 46 | I | A | 0.6109 | |
| 47 | A | A | 0.4619 | |
| 48 | A | A | 0.0000 | |
| 49 | A | A | 1.1325 | |
| 50 | I | A | 2.0397 | |
| 51 | V | A | 1.1130 | |
| 52 | L | A | 0.0000 | |
| 53 | R | A | -1.1377 | |
| 54 | G | A | -0.8365 | |
| 55 | L | A | -1.0078 | |
| 56 | A | A | -2.0568 | |
| 57 | K | A | -3.1743 | |
| 58 | D | A | -3.0991 | |
| 59 | G | A | -2.3197 | |
| 60 | K | A | -2.2742 | |
| 61 | F | A | -0.9978 | |
| 62 | A | A | -1.1314 | |
| 63 | A | A | 0.0000 | |
| 64 | A | A | -1.0701 | |
| 65 | E | A | -2.2093 | |
| 66 | A | A | -2.1736 | |
| 67 | A | A | -1.6559 | |
| 68 | A | A | -2.1410 | |
| 69 | K | A | -2.7612 | |
| 70 | M | A | 0.0000 | |
| 71 | K | A | -3.0181 | |
| 72 | K | A | -2.9045 | |
| 73 | D | A | 0.0000 | |
| 74 | D | A | 0.0000 | |
| 75 | Q | A | -1.1754 | |
| 76 | I | A | 0.2271 | |
| 77 | A | A | 0.0000 | |
| 78 | A | A | 0.0000 | |
| 79 | A | A | 0.2411 | |
| 80 | I | A | 0.0000 | |
| 81 | A | A | 0.0000 | |
| 82 | L | A | 0.2278 | |
| 83 | R | A | -1.6592 | |
| 84 | G | A | 0.0000 | |
| 85 | M | A | -0.3248 | |
| 86 | A | A | -0.7866 | |
| 87 | K | A | -1.8534 | |
| 88 | D | A | -0.8937 | |
| 89 | G | A | 0.0000 | |
| 90 | K | A | -1.4614 | |
| 91 | F | A | -1.0143 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.0000 | |
| 94 | K | A | -2.3026 | |
| 95 | E | A | -1.6257 | |
| 96 | A | A | 0.0000 | |
| 97 | A | A | -2.1696 | |
| 98 | A | A | -1.7249 | |
| 99 | K | A | -1.7356 | |
| 100 | Q | A | -1.6239 | |
| 101 | N | A | -2.3531 | |
| 102 | K | A | -2.6886 | |
| 103 | N | A | -2.7741 | |
| 104 | D | A | -2.4400 | |
| 105 | Q | A | -1.6720 | |
| 106 | I | A | 0.1845 | |
| 107 | A | A | 0.2607 | |
| 108 | A | A | 0.0000 | |
| 109 | A | A | 0.0000 | |
| 110 | I | A | 2.1525 | |
| 111 | V | A | 1.9275 | |
| 112 | L | A | 0.0000 | |
| 113 | R | A | 0.0000 | |
| 114 | G | A | -0.1169 | |
| 115 | L | A | 0.0000 | |
| 116 | A | A | 0.0000 | |
| 117 | K | A | -1.2793 | |
| 118 | G | A | -1.1668 | |
| 119 | G | A | -1.3855 | |
| 120 | K | A | -1.5243 | |
| 121 | F | A | -0.3989 | |
| 122 | A | A | -0.8132 | |
| 123 | N | A | -1.7109 | |
| 124 | A | A | -1.3167 | |
| 125 | E | A | -2.3872 | |
| 126 | A | A | -1.5832 | |
| 127 | A | A | -1.6524 | |
| 128 | A | A | -1.8621 | |
| 129 | K | A | -2.3300 | |
| 130 | K | A | -2.1131 | |
| 131 | K | A | -3.1089 | |
| 132 | K | A | -2.9774 | |
| 133 | N | A | -2.2890 | |
| 134 | D | A | -2.0414 | |
| 135 | Q | A | 0.0000 | |
| 136 | I | A | 0.0000 | |
| 137 | A | A | 0.0000 | |
| 138 | A | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | V | A | 0.0000 | |
| 142 | L | A | 0.0000 | |
| 143 | R | A | -0.4763 | |
| 144 | G | A | -0.7271 | |
| 145 | V | A | -0.0671 | |
| 146 | A | A | -0.6020 | |
| 147 | K | A | -2.0392 | |
| 148 | S | A | -1.5423 | |
| 149 | G | A | -1.2489 | |
| 150 | K | A | -2.0777 | |
| 151 | F | A | -1.3513 | |
| 152 | A | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | A | A | 0.0000 | |
| 155 | E | A | -1.4565 | |
| 156 | A | A | -0.7637 | |
| 157 | A | A | 0.0000 | |
| 158 | A | A | -1.5605 | |
| 159 | K | A | -1.8662 | |
| 160 | I | A | -0.1090 | |
| 161 | T | A | 0.0000 | |
| 162 | R | A | -2.0746 | |
| 163 | N | A | -1.5382 | |
| 164 | D | A | -0.3153 | |
| 165 | E | A | 0.0000 | |
| 166 | I | A | 0.5411 | |
| 167 | A | A | 0.5591 | |
| 168 | A | A | 0.0000 | |
| 169 | A | A | 0.0000 | |
| 170 | I | A | 1.6112 | |
| 171 | V | A | 0.0000 | |
| 172 | L | A | 0.0000 | |
| 173 | R | A | -1.0737 | |
| 174 | G | A | -1.2794 | |
| 175 | M | A | -0.9636 | |
| 176 | A | A | -1.3673 | |
| 177 | K | A | -2.4902 | |
| 178 | G | A | -1.8108 | |
| 179 | G | A | -2.1306 | |
| 180 | R | A | -2.2141 | |
| 181 | F | A | -0.8674 | |
| 182 | F | A | 0.2630 | |
| 183 | A | A | -0.1874 | |
| 184 | S | A | -0.5613 | |
| 185 | G | A | -0.7748 | |
| 186 | G | A | -0.9998 | |
| 187 | G | A | -0.8197 |