| Chain sequence(s) |
Y: MPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVC
input PDB |
| Selected Chain(s) | Y |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with Y chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 18 | M | Y | 0.7340 | |
| 19 | P | Y | 0.0203 | |
| 20 | R | Y | -0.6783 | |
| 21 | W | Y | -0.3620 | |
| 22 | Y | Y | -0.5959 | |
| 23 | F | Y | -0.5568 | |
| 24 | D | Y | -0.8132 | |
| 25 | L | Y | 0.2149 | |
| 26 | S | Y | -0.6575 | |
| 27 | K | Y | -1.9770 | |
| 28 | G | Y | -1.4569 | |
| 29 | K | Y | -1.7451 | |
| 30 | C | Y | 0.0000 | |
| 31 | V | Y | -0.7676 | |
| 32 | R | Y | -0.8416 | |
| 33 | F | Y | 0.5789 | |
| 34 | I | Y | 2.0097 | |
| 35 | Y | Y | 1.7833 | |
| 36 | G | Y | 0.4897 | |
| 37 | G | Y | 0.0308 | |
| 38 | C | Y | -0.1901 | |
| 39 | G | Y | -1.4581 | |
| 40 | G | Y | -1.2468 | |
| 41 | N | Y | -2.5237 | |
| 42 | R | Y | -3.0324 | |
| 43 | N | Y | -2.3512 | |
| 44 | N | Y | -2.0524 | |
| 45 | F | Y | -1.2658 | |
| 46 | E | Y | -1.1324 | |
| 47 | S | Y | -0.7500 | |
| 48 | E | Y | -1.0474 | |
| 49 | D | Y | -1.0085 | |
| 50 | Y | Y | 1.0026 | |
| 51 | C | Y | 0.0000 | |
| 52 | M | Y | 0.5860 | |
| 53 | A | Y | 1.2506 | |
| 54 | V | Y | 2.3854 | |
| 55 | C | Y | 1.4578 |