Project name: query_structure

Status: done

Started: 2026-03-17 01:14:00
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPGISQGYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAYSRPLPSKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:46)
Show buried residues

Minimal score value
-3.6119
Maximal score value
1.5582
Average score
-0.7121
Total score value
-64.0921

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.5582
2 S A -0.0296
3 D A -0.3254
4 V A -1.2471
5 P A 0.0000
6 R A -3.5901
7 D A -3.6119
8 L A 0.0000
9 E A -2.1968
10 V A 0.0830
11 V A 1.5292
12 A A 0.8876
13 A A 0.2962
14 T A -0.5333
15 P A -1.1364
16 T A -1.0045
17 S A -0.5359
18 L A 0.0000
19 L A 0.7268
20 I A 0.0000
21 S A -1.2051
22 W A 0.0000
23 D A -3.4886
24 A A -1.8246
25 P A -0.6121
26 G A -0.5415
27 I A 0.0875
28 S A -0.6748
29 Q A -1.3389
30 G A -0.7131
31 Y A -0.1234
32 Y A 0.0000
33 R A -0.3493
34 I A 0.0000
35 T A 0.0000
36 Y A -0.3794
37 G A 0.0000
38 E A -1.5543
39 T A -1.2231
40 G A -1.2320
41 G A -1.3595
42 N A -1.5335
43 S A -0.8753
44 P A -0.3798
45 V A 0.3224
46 Q A -1.0990
47 E A -1.6050
48 F A -0.6284
49 T A -0.1220
50 V A 0.0000
51 P A -0.8057
52 G A -0.7683
53 S A -1.1649
54 K A -1.9056
55 S A -1.3497
56 T A -0.7466
57 A A 0.0000
58 T A 0.2327
59 I A 0.0000
60 S A -0.6583
61 G A -1.0282
62 L A 0.0000
63 K A -2.3703
64 P A -1.6737
65 G A -1.4511
66 V A -1.4391
67 D A -2.0674
68 Y A 0.0000
69 T A -0.7540
70 I A 0.0000
71 T A -0.1042
72 V A 0.0000
73 Y A -0.0810
74 A A 0.0000
75 Y A -0.1065
76 S A 0.0000
77 R A -1.5469
78 P A -0.5622
79 L A 0.5053
80 P A -0.2188
81 S A -0.7483
82 K A -1.5359
83 P A -0.9154
84 I A -0.6312
85 S A -0.6431
86 I A -0.6937
87 N A -1.6995
88 Y A -1.4337
89 R A -2.5117
90 T A -1.6323
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Laboratory of Theory of Biopolymers 2018