Project name: query_structure

Status: done

Started: 2026-03-16 22:50:39
Settings
Chain sequence(s) A: YCQKWMWTCDSERKCCEGMVCRLWCKKKLW
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:34)
Show buried residues

Minimal score value
-3.0833
Maximal score value
1.5694
Average score
-0.4306
Total score value
-12.917

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Y A 0.7509
2 C A 0.4975
3 Q A 0.0000
4 K A -0.9601
5 W A -0.0110
6 M A 0.6663
7 W A 1.1768
8 T A 0.2595
9 C A -0.6936
10 D A -2.5619
11 S A -2.2134
12 E A -3.0833
13 R A -2.7143
14 K A -2.4713
15 C A 0.0000
16 C A -1.0494
17 E A -2.1856
18 G A -1.3331
19 M A 0.0000
20 V A 0.7772
21 C A 0.3655
22 R A -0.1660
23 L A 1.4553
24 W A 1.5694
25 C A 0.0000
26 K A -0.8029
27 K A -1.3409
28 K A -1.0315
29 L A 0.8518
30 W A 1.3311
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Laboratory of Theory of Biopolymers 2018