Project name: 5616

Status: done

Started: 2026-04-10 12:13:12
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASGLGPYPFSSYGVAWFRQAPGQGLEAVAAIGGDGSVTYYHPSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAGGGGPEAGRYDYWGQGTLVTVS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:44)
Show buried residues

Minimal score value
-3.2732
Maximal score value
1.7671
Average score
-0.6425
Total score value
-79.0296

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4311
2 V H -0.8570
3 Q H -0.8807
4 L H 0.0000
5 V H 0.8028
6 E H 0.0000
7 S H -0.2524
8 G H -0.7701
9 G H 0.2065
10 G H 0.7645
11 L H 1.4843
12 V H -0.0048
13 Q H -1.3587
14 P H -1.8028
15 G H -1.6062
16 G H 0.0000
17 S H -1.4494
18 L H -0.9849
19 R H -2.1479
20 L H 0.0000
21 S H -0.4205
22 C H 0.0000
23 A H -0.2510
24 A H 0.0000
25 S H -0.9613
26 G H -0.9891
27 L H 0.0000
28 G H -0.3900
29 P H 0.0571
30 Y H 0.8256
31 P H -0.0026
32 F H 0.0000
33 S H -1.0062
34 S H -0.4491
35 Y H 0.0000
36 G H -0.8491
37 V H 0.0000
38 A H 0.0000
39 W H 0.0000
40 F H 0.0000
41 R H 0.0000
42 Q H -0.4670
43 A H -0.8480
44 P H -0.8934
45 G H -1.2683
46 Q H -1.7118
47 G H -1.0073
48 L H -0.1944
49 E H -0.5820
50 A H -0.3981
51 V H 0.0000
52 A H 0.0000
53 A H 0.0000
54 I H 0.0000
55 G H -0.5979
56 G H -1.3682
57 D H -2.1136
58 G H -1.1933
59 S H -0.4986
60 V H 0.5459
61 T H 0.7773
62 Y H 0.9271
63 Y H -0.1567
64 H H -0.7508
65 P H -0.9947
66 S H -1.1547
67 V H 0.0000
68 K H -2.0041
69 G H -1.6372
70 R H -1.5188
71 F H 0.0000
72 T H -0.8680
73 I H 0.0000
74 S H -0.6042
75 R H -1.3545
76 D H -1.9076
77 N H -2.0827
78 S H -1.6559
79 K H -2.4223
80 N H -1.8443
81 T H -1.0595
82 L H 0.0000
83 Y H -0.6169
84 L H 0.0000
85 Q H -1.5415
86 M H 0.0000
87 N H -2.0404
88 S H -1.5630
89 L H 0.0000
90 R H -2.7312
91 A H -1.9184
92 E H -2.3891
93 D H 0.0000
94 T H -0.4315
95 A H 0.0000
96 V H 0.9338
97 Y H 0.0000
98 Y H 0.4524
99 C H 0.0000
100 A H 0.0000
101 A H 0.0000
102 G H -1.4004
103 G H -1.8497
104 G H -1.3215
105 G H -1.1905
106 P H -1.5339
107 E H -2.7236
108 A H -1.9637
109 G H -2.3627
110 R H -3.2732
111 Y H 0.0000
112 D H -2.1217
113 Y H -0.7831
114 W H -0.0473
115 G H -0.0647
116 Q H -0.8533
117 G H 0.0000
118 T H 0.6707
119 L H 1.7671
120 V H 0.0000
121 T H 0.3604
122 V H 0.0000
123 S H -0.8610
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Laboratory of Theory of Biopolymers 2018