Project name: Pro_2

Status: done

Started: 2026-07-03 08:01:54
Settings
Chain sequence(s) A: TSLTITEPDVDDDSTSDMEAFMASVLVRYRKTLIEKTKYHLGYPFNLDLDYGALAQLQHFAINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEQDEYWGYITNGGTEGNLHGILIGREVFPDGIFYTSRESHYSIFKAARMYRMECVKVGTLINGEIDCADFKAKLLSNKDKPAIINLNIGTTVKGAVDDIDLVIQTLEECGFSHDRFYIHCDGALFGFMLPFLNRGPKITFKKPIGSVSVSGHKFMGCPTPCGVVITRLEHINALSRNVEYLASRDATITGSRNGHAPIILWYALNRKGFKGFQKEVQKCLRNAHYLKDRLREAGIPAMLNELSITVVFERPLDEEFVRRWQLACEGNIAHVIVMPNVTIEKLDEFLNELVQKRANWYNDGKAGPPCLAPDIGSENCDCDLHKLKH
B: TSLTITEPDVDDDSTSDMEAFMASVLVRYRKTLIEKTKYHLGYPFNLDLDYGALAQLQHFAINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEQDEYWGYITNGGTEGNLHGILIGREVFPDGIFYTSRESHYSIFKAARMYRMECVKVGTLINGEIDCADFKAKLLSNKDKPAIINLNIGTTVKGAVDDIDLVIQTLEECGFSHDRFYIHCDGALFGFMLPFLNRGPKITFKKPIGSVSVSGHKFMGCPTPCGVVITRLEHINALSRNVEYLASRDATITGSRNGHAPIILWYALNRKGFKGFQKEVQKCLRNAHYLKDRLREAGIPAMLNELSITVVFERPLDEEFVRRWQLACEGNIAHVIVMPNVTIEKLDEFLNELVQKRANWYNDGKAGPPCLAPDIGSENCDCDLHKLKH
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:12:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:12:20)
Show buried residues

Minimal score value
-4.307
Maximal score value
1.1588
Average score
-0.8046
Total score value
-675.9038

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 T A -0.1272
2 S A -0.1508
3 L A 0.0177
4 T A -0.0358
5 I A -0.0736
6 T A -0.6092
7 E A -1.4917
8 P A -2.4748
9 D A -2.7494
10 V A -1.0580
11 D A -3.1736
12 D A -3.7225
13 D A -3.8343
14 S A -3.4228
15 T A -2.9851
16 S A -2.8364
17 D A -3.3350
18 M A -2.5025
19 E A -2.3554
20 A A -1.1543
21 F A -0.1848
22 M A 0.0000
23 A A -0.2320
24 S A -0.0074
25 V A -0.0934
26 L A 0.0000
27 V A -0.0842
28 R A -1.9318
29 Y A 0.0000
30 R A -1.6877
31 K A -2.3989
32 T A -1.8941
33 L A 0.0000
34 I A -0.8531
35 E A -2.5375
36 K A -2.3935
37 T A -1.3607
38 K A -2.2358
39 Y A -1.8283
40 H A 0.0000
41 L A 0.0000
42 G A 0.0000
43 Y A 0.2504
44 P A 0.0000
45 F A 0.0000
46 N A 0.0000
47 L A -1.2813
48 D A -2.1989
49 L A -1.8113
50 D A -2.3108
51 Y A -1.2580
52 G A -1.0688
53 A A -0.6490
54 L A 0.0000
55 A A -0.6198
56 Q A -0.6627
57 L A 0.0000
58 Q A -0.9715
59 H A -1.7499
60 F A 0.0000
61 A A 0.0000
62 I A 0.0000
63 N A 0.0000
64 N A 0.0000
65 L A -0.1580
66 G A -0.4429
67 D A -0.3411
68 P A 0.0000
69 F A 0.5678
70 I A 0.6185
71 E A -0.6717
72 S A -0.5544
73 N A -0.7757
74 Y A 0.0000
75 G A -0.8903
76 V A 0.0000
77 H A 0.0000
78 S A 0.0000
79 R A -0.3749
80 Q A -0.4488
81 F A 0.0000
82 E A 0.0000
83 V A 0.0000
84 G A 0.0000
85 V A 0.0000
86 L A 0.0000
87 D A -1.0805
88 W A -0.7919
89 F A 0.0000
90 A A 0.0000
91 R A -2.8867
92 L A -1.1216
93 W A 0.0000
94 E A -3.0438
95 I A 0.0000
96 E A -4.2409
97 Q A -3.8695
98 D A -3.6244
99 E A -3.6228
100 Y A 0.0000
101 W A 0.0000
102 G A 0.0000
103 Y A 0.0000
104 I A 0.0000
105 T A 0.0000
106 N A 0.0000
107 G A 0.0000
108 G A -0.0804
109 T A 0.0000
110 E A 0.0000
111 G A 0.0000
112 N A 0.0000
113 L A 0.0000
114 H A 0.0000
115 G A 0.0000
116 I A 0.0000
117 L A 0.0000
118 I A 0.0000
119 G A 0.0000
120 R A 0.0000
121 E A -0.5151
122 V A -0.4679
123 F A -0.7836
124 P A -1.0641
125 D A -2.2940
126 G A 0.0000
127 I A 0.0000
128 F A 0.0000
129 Y A 0.0000
130 T A 0.0000
131 S A 0.0000
132 R A -2.5210
133 E A -1.4202
134 S A 0.0000
135 H A -0.3602
136 Y A 0.1890
137 S A 0.0000
138 I A 0.0000
139 F A 0.0259
140 K A 0.0000
141 A A 0.0000
142 A A 0.0000
143 R A -0.8346
144 M A 0.0000
145 Y A 0.0000
146 R A -1.5853
147 M A -1.6254
148 E A -2.2555
149 C A -0.9737
150 V A -1.0636
151 K A -2.2173
152 V A 0.0000
153 G A -0.9582
154 T A -0.3318
155 L A 1.1584
156 I A 1.1588
157 N A 0.2102
158 G A 0.0000
159 E A -0.3971
160 I A 0.0000
161 D A -0.6185
162 C A -0.4970
163 A A -0.5712
164 D A -1.0339
165 F A 0.0000
166 K A -1.2936
167 A A -0.5412
168 K A -1.0117
169 L A 0.0000
170 L A -0.4469
171 S A -0.8426
172 N A -1.6275
173 K A -2.4491
174 D A -2.8912
175 K A -2.8142
176 P A -2.0665
177 A A 0.0000
178 I A 0.0000
179 I A 0.0000
180 N A 0.0000
181 L A 0.0000
182 N A 0.0000
183 I A 0.0000
184 G A -0.0724
185 T A 0.0000
186 T A 0.0143
187 V A -0.1375
188 K A 0.0000
189 G A 0.0000
190 A A 0.0000
191 V A -0.5065
192 D A 0.0000
193 D A -1.2589
194 I A 0.0000
195 D A -1.7321
196 L A -0.3481
197 V A 0.0000
198 I A 0.0000
199 Q A -1.9308
200 T A 0.0000
201 L A 0.0000
202 E A -2.7213
203 E A -2.8893
204 C A 0.0000
205 G A -1.8736
206 F A 0.0000
207 S A -2.0566
208 H A -2.3027
209 D A -2.4936
210 R A -2.2136
211 F A 0.0000
212 Y A 0.0000
213 I A 0.0000
214 H A 0.0000
215 C A 0.0000
216 D A 0.0000
217 G A 0.0000
218 A A -0.0971
219 L A 0.0000
220 F A 0.0000
221 G A 0.0000
222 F A 0.0000
223 M A 0.0000
224 L A 0.0000
225 P A -0.8130
226 F A 0.0000
227 L A -1.7728
228 N A -2.4077
229 R A -3.0971
230 G A -2.3795
231 P A -1.8764
232 K A -2.5726
233 I A 0.0000
234 T A 0.0000
235 F A 0.0000
236 K A -2.2088
237 K A 0.0000
238 P A -1.0777
239 I A 0.0000
240 G A 0.0000
241 S A 0.0000
242 V A 0.0000
243 S A 0.0000
244 V A 0.0000
245 S A 0.0000
246 G A 0.0000
247 H A 0.0000
248 K A -0.1769
249 F A 0.0000
250 M A 0.0000
251 G A 0.0000
252 C A 0.0000
253 P A -0.4822
254 T A -0.2149
255 P A 0.0000
256 C A 0.0000
257 G A 0.0000
258 V A 0.0000
259 V A 0.0000
260 I A 0.0000
261 T A 0.0000
262 R A -1.6199
263 L A -1.7526
264 E A -2.1761
265 H A -1.1026
266 I A 0.0000
267 N A -1.7311
268 A A -1.5225
269 L A 0.0000
270 S A -2.2586
271 R A -3.0092
272 N A -2.7148
273 V A 0.0000
274 E A -2.2208
275 Y A -0.4196
276 L A -0.6119
277 A A -0.2948
278 S A -0.6559
279 R A -1.4863
280 D A 0.0000
281 A A -0.5873
282 T A 0.0000
283 I A 0.0000
284 T A 0.0000
285 G A 0.0000
286 S A 0.0250
287 R A 0.0000
288 N A 0.0000
289 G A 0.0000
290 H A 0.0000
291 A A 0.0000
292 P A 0.0000
293 I A 0.0000
294 I A 0.0000
295 L A 0.0000
296 W A 0.0000
297 Y A 0.0000
298 A A 0.0000
299 L A 0.0000
300 N A 0.0000
301 R A -1.6333
302 K A -1.6212
303 G A 0.0000
304 F A -0.9852
305 K A -2.2098
306 G A -1.7091
307 F A 0.0000
308 Q A -2.2677
309 K A -2.9862
310 E A -2.2889
311 V A 0.0000
312 Q A -2.7578
313 K A -2.5543
314 C A 0.0000
315 L A 0.0000
316 R A -2.5174
317 N A 0.0000
318 A A 0.0000
319 H A -1.7802
320 Y A -1.0686
321 L A 0.0000
322 K A -1.6438
323 D A -2.1710
324 R A -2.0780
325 L A 0.0000
326 R A -2.2070
327 E A -2.6611
328 A A -1.4208
329 G A -1.2903
330 I A 0.0000
331 P A 0.0000
332 A A 0.0000
333 M A 0.0000
334 L A -0.6716
335 N A -1.1027
336 E A -2.1820
337 L A 0.0000
338 S A 0.0000
339 I A 0.0000
340 T A 0.0000
341 V A 0.0000
342 V A 0.0000
343 F A 0.0000
344 E A 0.0000
345 R A -1.4346
346 P A 0.0000
347 L A 0.1030
348 D A -1.8218
349 E A -3.3274
350 E A -3.6411
351 F A 0.0000
352 V A 0.0000
353 R A -3.8977
354 R A -3.5459
355 W A 0.0000
356 Q A 0.0000
357 L A 0.0000
358 A A -0.6514
359 C A -1.2116
360 E A -2.3692
361 G A -2.0102
362 N A -1.8699
363 I A 0.0000
364 A A 0.0000
365 H A 0.0000
366 V A 0.0000
367 I A 0.0000
368 V A 0.0000
369 M A 0.0000
370 P A 0.0000
371 N A -0.8732
372 V A 0.0000
373 T A -0.7836
374 I A -0.9283
375 E A -2.1816
376 K A -1.9006
377 L A 0.0000
378 D A -2.2610
379 E A -2.4379
380 F A 0.0000
381 L A -1.5845
382 N A -2.2109
383 E A -1.8557
384 L A 0.0000
385 V A -0.7305
386 Q A -1.8485
387 K A -1.5049
388 R A -1.0795
389 A A -1.4112
390 N A -2.0993
391 W A -1.1939
392 Y A -1.7372
393 N A -2.9610
394 D A -3.3230
395 G A -2.5616
396 K A -2.7094
397 A A -1.5676
398 G A -1.4451
399 P A -0.5449
400 P A -0.5964
401 C A -0.2191
402 L A 0.0000
403 A A -0.4493
404 P A -0.4229
405 D A -0.9128
406 I A 0.0000
407 G A 0.0000
408 S A -1.0522
409 E A -2.0819
410 N A -1.4520
411 C A 0.0000
412 D A -1.5226
413 C A -0.9933
414 D A -1.7130
415 L A 0.2687
416 H A -1.1258
417 K A -2.2774
418 L A -0.9245
419 K A -2.1779
420 H A -1.6147
1 T B -0.1085
2 S B -0.1238
3 L B 0.0794
4 T B -0.0687
5 I B -0.2053
6 T B -0.8068
7 E B -1.8451
8 P B -2.6299
9 D B -2.8404
10 V B -1.0989
11 D B -2.9935
12 D B -3.7245
13 D B -3.8389
14 S B -3.4712
15 T B -2.9949
16 S B -2.8508
17 D B -3.1795
18 M B -2.5717
19 E B -2.3755
20 A B -1.1910
21 F B -0.3005
22 M B 0.0000
23 A B -0.3875
24 S B -0.2029
25 V B -0.2571
26 L B 0.0000
27 V B -0.5966
28 R B -2.1734
29 Y B 0.0000
30 R B -1.7178
31 K B -2.3005
32 T B -1.6586
33 L B 0.0000
34 I B -0.3409
35 E B -1.8015
36 K B -1.6756
37 T B -1.0198
38 K B -1.9080
39 Y B -1.4642
40 H B 0.0000
41 L B 0.0000
42 G B 0.0000
43 Y B 0.2586
44 P B 0.0833
45 F B 0.0000
46 N B 0.0000
47 L B -1.2896
48 D B -2.2033
49 L B -1.8288
50 D B -2.3137
51 Y B -1.2680
52 G B -1.0773
53 A B -0.6463
54 L B 0.0000
55 A B -0.6021
56 Q B -0.5561
57 L B 0.0000
58 Q B -0.9144
59 H B -1.7022
60 F B 0.0000
61 A B 0.0000
62 I B 0.0000
63 N B 0.0000
64 N B 0.0000
65 L B -0.1404
66 G B -0.5791
67 D B -0.5525
68 P B 0.0000
69 F B 0.3101
70 I B -0.0713
71 E B -1.4855
72 S B -1.2173
73 N B -1.7598
74 Y B 0.0000
75 G B -1.4355
76 V B 0.0000
77 H B -0.6235
78 S B 0.0000
79 R B -0.5943
80 Q B -0.6288
81 F B 0.0000
82 E B 0.0000
83 V B 0.0000
84 G B 0.0000
85 V B 0.0000
86 L B 0.0000
87 D B -1.0722
88 W B -0.8194
89 F B 0.0000
90 A B 0.0000
91 R B -3.0245
92 L B -1.2268
93 W B 0.0000
94 E B -3.4144
95 I B 0.0000
96 E B -4.3070
97 Q B -3.8840
98 D B -3.5793
99 E B -3.5372
100 Y B 0.0000
101 W B 0.0000
102 G B 0.0000
103 Y B 0.0000
104 I B 0.0000
105 T B 0.0000
106 N B 0.0000
107 G B 0.0000
108 G B -0.0808
109 T B 0.0000
110 E B 0.0000
111 G B 0.0000
112 N B 0.0000
113 L B 0.0000
114 H B 0.0000
115 G B 0.0000
116 I B 0.0000
117 L B 0.0000
118 I B 0.0000
119 G B 0.0000
120 R B 0.0000
121 E B 0.0000
122 V B -0.4929
123 F B -0.6847
124 P B -0.9221
125 D B -2.2349
126 G B -1.7439
127 I B 0.0000
128 F B 0.0000
129 Y B 0.0000
130 T B 0.0000
131 S B 0.0000
132 R B -2.5292
133 E B -1.3449
134 S B 0.0000
135 H B -0.4796
136 Y B 0.0384
137 S B 0.0000
138 I B 0.0000
139 F B 0.0000
140 K B 0.0000
141 A B 0.0000
142 A B 0.0000
143 R B -0.9011
144 M B 0.0000
145 Y B 0.0000
146 R B -1.5503
147 M B -1.6349
148 E B -2.2528
149 C B -1.0023
150 V B -1.0378
151 K B -2.1563
152 V B 0.0000
153 G B -0.9542
154 T B 0.0000
155 L B 1.0931
156 I B 1.0841
157 N B 0.3590
158 G B 0.0000
159 E B -0.4490
160 I B 0.0000
161 D B -0.6332
162 C B -0.4879
163 A B -0.5401
164 D B -1.0579
165 F B 0.0000
166 K B -1.1076
167 A B -0.4875
168 K B -0.9361
169 L B 0.0000
170 L B -0.4809
171 S B -0.8199
172 N B -1.5769
173 K B -2.3226
174 D B -2.8106
175 K B -2.6985
176 P B -2.0105
177 A B 0.0000
178 I B 0.0000
179 I B 0.0000
180 N B 0.0000
181 L B 0.0000
182 N B 0.0000
183 I B 0.0000
184 G B -0.1359
185 T B 0.0000
186 T B -0.0328
187 V B -0.2090
188 K B 0.0000
189 G B 0.0000
190 A B 0.0000
191 V B 0.0000
192 D B 0.0000
193 D B -1.1654
194 I B 0.0000
195 D B -1.2638
196 L B -0.2872
197 V B 0.0000
198 I B 0.0000
199 Q B -1.9041
200 T B 0.0000
201 L B 0.0000
202 E B -3.0248
203 E B -3.0061
204 C B 0.0000
205 G B -1.9732
206 F B 0.0000
207 S B -2.1421
208 H B -2.3562
209 D B -2.4996
210 R B -2.2104
211 F B 0.0000
212 Y B 0.0000
213 I B 0.0000
214 H B 0.0000
215 C B 0.0000
216 D B 0.0000
217 G B 0.0000
218 A B -0.1095
219 L B 0.0000
220 F B 0.0000
221 G B 0.0000
222 F B 0.0000
223 M B 0.0000
224 L B 0.0000
225 P B 0.0000
226 F B 0.0000
227 L B 0.0000
228 N B -2.4576
229 R B -3.0380
230 G B -2.2244
231 P B -1.6451
232 K B -2.1826
233 I B 0.0000
234 T B 0.0000
235 F B 0.0000
236 K B -2.2635
237 K B 0.0000
238 P B -0.9943
239 I B 0.0000
240 G B 0.0000
241 S B 0.0000
242 V B 0.0000
243 S B 0.0000
244 V B 0.0000
245 S B 0.0000
246 G B 0.0000
247 H B 0.0000
248 K B -0.1843
249 F B 0.0000
250 M B 0.0000
251 G B 0.0000
252 C B 0.0000
253 P B -0.6709
254 T B -0.2154
255 P B 0.0000
256 C B 0.0000
257 G B 0.0000
258 V B 0.0000
259 V B 0.0000
260 I B 0.0000
261 T B 0.0000
262 R B -1.5789
263 L B -1.6822
264 E B -2.1506
265 H B -1.0658
266 I B 0.0000
267 N B -1.7359
268 A B -1.4907
269 L B 0.0000
270 S B -2.2021
271 R B -2.9794
272 N B -2.6038
273 V B 0.0000
274 E B -2.0503
275 Y B -0.0009
276 L B -0.3798
277 A B -0.1366
278 S B -0.5622
279 R B -1.5274
280 D B 0.0000
281 A B -0.5890
282 T B 0.0000
283 I B 0.0000
284 T B 0.0000
285 G B 0.0000
286 S B 0.0294
287 R B 0.0000
288 N B 0.0000
289 G B 0.0000
290 H B -0.2043
291 A B 0.0000
292 P B 0.0000
293 I B 0.0000
294 I B 0.0000
295 L B 0.0000
296 W B 0.0000
297 Y B 0.0000
298 A B 0.0000
299 L B 0.0000
300 N B 0.0000
301 R B -1.6258
302 K B -1.6443
303 G B 0.0000
304 F B -1.0756
305 K B -2.3491
306 G B -1.8142
307 F B 0.0000
308 Q B -2.5862
309 K B -3.1721
310 E B -2.4210
311 V B 0.0000
312 Q B -2.8713
313 K B -2.7074
314 C B 0.0000
315 L B -1.9778
316 R B -2.5505
317 N B 0.0000
318 A B 0.0000
319 H B -1.9562
320 Y B -1.1991
321 L B 0.0000
322 K B -1.8103
323 D B -2.4094
324 R B -2.1535
325 L B 0.0000
326 R B -2.2405
327 E B -2.6929
328 A B -1.4135
329 G B -1.2847
330 I B 0.0000
331 P B 0.0000
332 A B 0.0000
333 M B 0.0000
334 L B -0.7310
335 N B -1.0465
336 E B -2.0973
337 L B -1.0828
338 S B 0.0000
339 I B 0.0000
340 T B 0.0000
341 V B 0.0000
342 V B 0.0000
343 F B 0.0000
344 E B 0.0000
345 R B -1.5050
346 P B 0.0000
347 L B 0.1150
348 D B -1.5921
349 E B -2.9099
350 E B -3.1540
351 F B 0.0000
352 V B 0.0000
353 R B -2.5504
354 R B -2.5842
355 W B 0.0000
356 Q B 0.0000
357 L B 0.0000
358 A B -0.4705
359 C B -1.2027
360 E B -2.3839
361 G B -2.0190
362 N B -1.8737
363 I B 0.0000
364 A B 0.0000
365 H B 0.0000
366 V B 0.0000
367 I B 0.0000
368 V B 0.0000
369 M B 0.0000
370 P B 0.0000
371 N B -0.9061
372 V B 0.0000
373 T B -0.9707
374 I B -1.2150
375 E B -2.4644
376 K B -2.2209
377 L B 0.0000
378 D B -2.7128
379 E B -3.2508
380 F B 0.0000
381 L B -1.8696
382 N B -2.5540
383 E B -2.2635
384 L B 0.0000
385 V B -0.7243
386 Q B -1.8968
387 K B -1.5251
388 R B -1.0666
389 A B -1.3837
390 N B -2.0764
391 W B -1.0849
392 Y B -1.7449
393 N B -2.9554
394 D B -3.3215
395 G B -2.5598
396 K B -2.7094
397 A B -1.5689
398 G B -1.4454
399 P B -0.5329
400 P B -0.5601
401 C B -0.1132
402 L B 0.0000
403 A B -0.4169
404 P B -0.4182
405 D B -0.9108
406 I B 0.0000
407 G B 0.0000
408 S B -1.0325
409 E B -2.0621
410 N B -1.4129
411 C B 0.0000
412 D B -1.4672
413 C B -0.9341
414 D B -1.6730
415 L B 0.3261
416 H B -1.0160
417 K B -2.2362
418 L B -0.8953
419 K B -2.1706
420 H B -1.6215
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018