| Chain sequence(s) |
A: GPPPLNPEPPLRSTDEYVEPTDLLYVAETELITETGDPFADIVVNGKVVIPRVSAYQWRVFKLTLPDPNTLPLPSEDFVDFSTERLIWQLEAFEIKVFGPLGVGTYGHPNFNRLGDVENPTTPIHETEDDTVNFSFTPKLLQAYIIGDLPPIGKYTAPAPPAPGLPPGAEPPLTTVETLIEHGDMADIGFGAKDYAALLPEKNDVPDIILDTKTIVPDIEGMKAEPYGRRMFTYNRKESSKDVKKYVRDGPELHPLPASPPPSPLYTPPPPSSPYAVRPSTDYFTIPDRGEITEEDLLFNKPIFLEKTEGLNNGVLWHNQLYVTVVDNSRAEIETIKTQVSTPATNVYNASNYVTSKRYTREYQLSLIVRLCRIPLTPEVLEELRRIDPRILEDWRLPDIPPVERPDPLAGKKFIEIDLTDKLSRNLSETELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6917 | |
| 2 | P | A | -0.3926 | |
| 3 | P | A | -0.4511 | |
| 4 | P | A | -0.4785 | |
| 5 | L | A | 0.4463 | |
| 6 | N | A | -1.3190 | |
| 7 | P | A | -1.6098 | |
| 8 | E | A | -2.2347 | |
| 9 | P | A | -1.4395 | |
| 10 | P | A | -0.7458 | |
| 11 | L | A | -0.2302 | |
| 12 | R | A | -1.3799 | |
| 13 | S | A | -1.3720 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.2791 | |
| 16 | E | A | -3.0837 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | E | A | -2.2952 | |
| 20 | P | A | -1.6951 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.8349 | |
| 23 | L | A | 0.0000 | |
| 24 | L | A | -0.9760 | |
| 25 | Y | A | -1.0905 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.5171 | |
| 29 | T | A | 0.0000 | |
| 30 | E | A | -1.3450 | |
| 31 | L | A | 0.1978 | |
| 32 | I | A | 0.0883 | |
| 33 | T | A | -0.1268 | |
| 34 | E | A | -0.3634 | |
| 35 | T | A | -0.4360 | |
| 36 | G | A | 0.0000 | |
| 37 | D | A | -0.9095 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.3368 | |
| 40 | A | A | -0.1677 | |
| 41 | D | A | 0.0690 | |
| 42 | I | A | 1.9135 | |
| 43 | V | A | 2.5591 | |
| 44 | V | A | 1.7513 | |
| 45 | N | A | -0.5270 | |
| 46 | G | A | -0.3418 | |
| 47 | K | A | -0.1037 | |
| 48 | V | A | 2.1521 | |
| 49 | V | A | 2.5430 | |
| 50 | I | A | 1.5512 | |
| 51 | P | A | 0.3223 | |
| 52 | R | A | -0.4641 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.1804 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.4370 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.0561 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.3011 | |
| 70 | T | A | -0.2548 | |
| 71 | L | A | 0.0031 | |
| 72 | P | A | -0.2114 | |
| 73 | L | A | -0.3936 | |
| 74 | P | A | -0.7001 | |
| 75 | S | A | -1.5459 | |
| 76 | E | A | -2.8909 | |
| 77 | D | A | -2.8558 | |
| 78 | F | A | -1.5023 | |
| 79 | V | A | 0.0000 | |
| 80 | D | A | -2.0540 | |
| 81 | F | A | -0.4701 | |
| 82 | S | A | -0.4686 | |
| 83 | T | A | -0.5419 | |
| 84 | E | A | -0.6669 | |
| 85 | R | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | E | A | -0.5772 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | E | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | K | A | -0.5259 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.4397 | |
| 99 | G | A | -0.3741 | |
| 100 | P | A | -0.4130 | |
| 101 | L | A | -0.0063 | |
| 102 | G | A | 0.0493 | |
| 103 | V | A | 0.6357 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.0197 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.7924 | |
| 108 | H | A | -1.4227 | |
| 109 | P | A | -1.5070 | |
| 110 | N | A | -2.3076 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -0.8515 | |
| 114 | L | A | -0.9240 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3246 | |
| 117 | V | A | -1.0279 | |
| 118 | E | A | -2.3523 | |
| 119 | N | A | -2.2896 | |
| 120 | P | A | -1.2335 | |
| 121 | T | A | -0.7615 | |
| 122 | T | A | -0.3579 | |
| 123 | P | A | 0.1229 | |
| 124 | I | A | -0.3136 | |
| 125 | H | A | -1.3604 | |
| 126 | E | A | -2.7202 | |
| 127 | T | A | -2.6201 | |
| 128 | E | A | -3.1684 | |
| 129 | D | A | -3.1900 | |
| 130 | D | A | -2.3013 | |
| 131 | T | A | -1.6002 | |
| 132 | V | A | -0.9900 | |
| 133 | N | A | -1.5773 | |
| 134 | F | A | -0.7603 | |
| 135 | S | A | -0.4526 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | 0.1785 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | A | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.1617 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | -0.1980 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -1.2201 | |
| 155 | Y | A | -0.8908 | |
| 156 | T | A | -0.2902 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | 0.1055 | |
| 159 | A | A | 0.2577 | |
| 160 | P | A | -0.2591 | |
| 161 | P | A | -0.4272 | |
| 162 | A | A | -0.1826 | |
| 163 | P | A | -0.3297 | |
| 164 | G | A | -0.2596 | |
| 165 | L | A | 0.0848 | |
| 166 | P | A | -0.4030 | |
| 167 | P | A | -0.6663 | |
| 168 | G | A | -0.7327 | |
| 169 | A | A | -0.8455 | |
| 170 | E | A | -1.5084 | |
| 171 | P | A | -0.7078 | |
| 172 | P | A | -0.0166 | |
| 173 | L | A | 1.1672 | |
| 174 | T | A | 0.5457 | |
| 175 | T | A | -0.2058 | |
| 176 | V | A | -0.5777 | |
| 177 | E | A | -1.7536 | |
| 178 | T | A | -0.8144 | |
| 179 | L | A | -0.5448 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.0516 | |
| 182 | H | A | -1.0063 | |
| 183 | G | A | -0.6900 | |
| 184 | D | A | -0.7597 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.5523 | |
| 190 | F | A | -0.0617 | |
| 191 | G | A | -0.3141 | |
| 192 | A | A | -0.5867 | |
| 193 | K | A | -0.9386 | |
| 194 | D | A | -0.9841 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.4023 | |
| 197 | A | A | -0.5257 | |
| 198 | L | A | -0.3388 | |
| 199 | L | A | -1.1121 | |
| 200 | P | A | -1.7007 | |
| 201 | E | A | -2.6771 | |
| 202 | K | A | -3.2447 | |
| 203 | N | A | -2.1271 | |
| 204 | D | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.6310 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | 0.0000 | |
| 211 | D | A | -2.3678 | |
| 212 | T | A | -1.4607 | |
| 213 | K | A | -1.3571 | |
| 214 | T | A | 0.0000 | |
| 215 | I | A | 0.0000 | |
| 216 | V | A | -0.1431 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -1.1784 | |
| 219 | I | A | -1.2395 | |
| 220 | E | A | -2.4707 | |
| 221 | G | A | -1.8858 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.8857 | |
| 224 | A | A | -1.7247 | |
| 225 | E | A | -1.2548 | |
| 226 | P | A | -0.5392 | |
| 227 | Y | A | -0.4977 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.3403 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7982 | |
| 234 | Y | A | -0.3658 | |
| 235 | N | A | -0.9850 | |
| 236 | R | A | -1.5747 | |
| 237 | K | A | -1.9058 | |
| 238 | E | A | -1.6359 | |
| 239 | S | A | -1.4602 | |
| 240 | S | A | -1.8303 | |
| 241 | K | A | -2.6717 | |
| 242 | D | A | -2.5859 | |
| 243 | V | A | -1.1438 | |
| 244 | K | A | -1.9513 | |
| 245 | K | A | -1.7320 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8317 | |
| 249 | D | A | -1.7495 | |
| 250 | G | A | -1.0588 | |
| 251 | P | A | -0.6100 | |
| 252 | E | A | -0.4161 | |
| 253 | L | A | 0.3800 | |
| 254 | H | A | -0.4042 | |
| 255 | P | A | -0.3866 | |
| 256 | L | A | 0.5726 | |
| 257 | P | A | 0.1378 | |
| 258 | A | A | -0.0740 | |
| 259 | S | A | -0.0526 | |
| 260 | P | A | -0.5484 | |
| 261 | P | A | -0.3817 | |
| 262 | P | A | -0.2783 | |
| 263 | S | A | 0.2389 | |
| 264 | P | A | 0.4479 | |
| 265 | L | A | 1.6343 | |
| 266 | Y | A | 1.0592 | |
| 267 | T | A | 0.1340 | |
| 268 | P | A | 0.0995 | |
| 269 | P | A | 0.0051 | |
| 270 | P | A | -0.4066 | |
| 271 | P | A | -0.1156 | |
| 272 | S | A | -0.1383 | |
| 273 | S | A | 0.2576 | |
| 274 | P | A | 0.3715 | |
| 275 | Y | A | 1.2815 | |
| 276 | A | A | 0.9504 | |
| 277 | V | A | 1.3597 | |
| 278 | R | A | 0.2011 | |
| 279 | P | A | -0.4383 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.2558 | |
| 282 | D | A | -0.5664 | |
| 283 | Y | A | 0.6020 | |
| 284 | F | A | 0.0000 | |
| 285 | T | A | -0.9380 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.4925 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.5793 | |
| 291 | E | A | -1.9619 | |
| 292 | I | A | -1.4022 | |
| 293 | T | A | -2.1060 | |
| 294 | E | A | -2.9854 | |
| 295 | E | A | -3.2272 | |
| 296 | D | A | -2.8631 | |
| 297 | L | A | 0.0000 | |
| 298 | L | A | -1.4345 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3798 | |
| 301 | K | A | -1.7729 | |
| 302 | P | A | -0.7331 | |
| 303 | I | A | -0.1276 | |
| 304 | F | A | -0.1711 | |
| 305 | L | A | -1.0069 | |
| 306 | E | A | -2.4876 | |
| 307 | K | A | -3.1412 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.5093 | |
| 310 | G | A | -1.5532 | |
| 311 | L | A | -0.8776 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.5158 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8811 | |
| 319 | N | A | -0.7754 | |
| 320 | Q | A | -0.6286 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -1.6605 | |
| 333 | I | A | -1.3884 | |
| 334 | E | A | -2.1704 | |
| 335 | T | A | -1.2481 | |
| 336 | I | A | -0.0812 | |
| 337 | K | A | -0.8825 | |
| 338 | T | A | -0.0093 | |
| 339 | Q | A | -0.1303 | |
| 340 | V | A | 1.4628 | |
| 341 | S | A | 0.6151 | |
| 342 | T | A | 0.0431 | |
| 343 | P | A | -0.0260 | |
| 344 | A | A | -0.0327 | |
| 345 | T | A | -0.0016 | |
| 346 | N | A | -0.2624 | |
| 347 | V | A | 1.4875 | |
| 348 | Y | A | 1.2912 | |
| 349 | N | A | -0.1712 | |
| 350 | A | A | -0.1665 | |
| 351 | S | A | 0.1744 | |
| 352 | N | A | 0.2454 | |
| 353 | Y | A | 0.7684 | |
| 354 | V | A | 1.5766 | |
| 355 | T | A | 0.1405 | |
| 356 | S | A | -0.5533 | |
| 357 | K | A | -1.5511 | |
| 358 | R | A | -1.3951 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.7797 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.1019 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.4012 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | R | A | -0.6584 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -1.0730 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6825 | |
| 376 | L | A | -0.2977 | |
| 377 | T | A | -0.7471 | |
| 378 | P | A | -1.2495 | |
| 379 | E | A | -2.1161 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -1.2783 | |
| 382 | E | A | -2.2467 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -1.8723 | |
| 386 | R | A | -1.4291 | |
| 387 | I | A | 0.0000 | |
| 388 | D | A | -0.9790 | |
| 389 | P | A | -1.1967 | |
| 390 | R | A | -1.8430 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | E | A | -2.1086 | |
| 394 | D | A | -2.6267 | |
| 395 | W | A | -1.8657 | |
| 396 | R | A | -2.7537 | |
| 397 | L | A | -1.6184 | |
| 398 | P | A | -1.5135 | |
| 399 | D | A | -2.1108 | |
| 400 | I | A | -1.1843 | |
| 401 | P | A | -0.8674 | |
| 402 | P | A | -1.0667 | |
| 403 | V | A | 0.1290 | |
| 404 | E | A | -2.0239 | |
| 405 | R | A | -2.3120 | |
| 406 | P | A | -1.9773 | |
| 407 | D | A | -2.5940 | |
| 408 | P | A | -1.4250 | |
| 409 | L | A | -1.0590 | |
| 410 | A | A | -1.3041 | |
| 411 | G | A | -1.4076 | |
| 412 | K | A | -1.7480 | |
| 413 | K | A | -2.4168 | |
| 414 | F | A | -1.3948 | |
| 415 | I | A | -1.1128 | |
| 416 | E | A | -2.2545 | |
| 417 | I | A | -1.7466 | |
| 418 | D | A | -2.7329 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9968 | |
| 421 | D | A | -2.8666 | |
| 422 | K | A | -2.8168 | |
| 423 | L | A | -1.6678 | |
| 424 | S | A | -2.0887 | |
| 425 | R | A | -2.4372 | |
| 426 | N | A | -2.5050 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.9329 | |
| 429 | E | A | -2.9816 | |
| 430 | T | A | -2.0269 | |
| 431 | E | A | -1.9547 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.8882 | |
| 435 | L | A | -0.6107 | |
| 436 | Y | A | -0.2712 | |
| 437 | L | A | 0.1468 | |
| 438 | N | A | -1.4794 | |
| 439 | R | A | -1.9172 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine