Chain sequence(s) |
A: QVQLVESGGALVQPGGSLRLTCKPLGANFDTYAVAWFRQAPGKERVGSCLNKGDEDKYYSDAVKGRFTISWNDAKNMVFLEMTDLMADDTGVYYCAGGWFAPLIAAVTYGSPFEYANWGQGTQVTVS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38) [INFO] Main: Simulation completed successfully. (00:01:38) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.2306 | |
2 | V | A | -1.0084 | |
3 | Q | A | -0.9120 | |
4 | L | A | 0.0000 | |
5 | V | A | -0.0954 | |
6 | E | A | -0.6867 | |
7 | S | A | -0.8798 | |
8 | G | A | -0.9955 | |
9 | G | A | -0.6547 | |
10 | A | A | 0.0625 | |
11 | L | A | 1.0305 | |
12 | V | A | 0.0000 | |
13 | Q | A | -1.2792 | |
14 | P | A | -1.2634 | |
15 | G | A | -1.5497 | |
16 | G | A | -1.0476 | |
17 | S | A | -1.4185 | |
18 | L | A | -1.1014 | |
19 | R | A | -2.0519 | |
20 | L | A | 0.0000 | |
21 | T | A | -0.8031 | |
22 | C | A | 0.0000 | |
23 | K | A | -1.1234 | |
24 | P | A | -0.7838 | |
25 | L | A | 0.0669 | |
26 | G | A | -0.5695 | |
27 | A | A | -1.1683 | |
28 | N | A | -2.2601 | |
29 | F | A | 0.0000 | |
30 | D | A | -2.1049 | |
31 | T | A | 0.0000 | |
32 | Y | A | 1.3350 | |
33 | A | A | 0.0000 | |
34 | V | A | 0.0000 | |
35 | A | A | 0.0000 | |
36 | W | A | 0.0000 | |
37 | F | A | 0.0000 | |
38 | R | A | 0.0000 | |
39 | Q | A | -1.4483 | |
40 | A | A | 0.0000 | |
41 | P | A | -1.2857 | |
42 | G | A | -1.7363 | |
43 | K | A | -2.9326 | |
44 | E | A | -2.7747 | |
45 | R | A | -1.6423 | |
46 | V | A | 0.0000 | |
47 | G | A | 0.0000 | |
48 | S | A | 0.0000 | |
49 | C | A | 0.0000 | |
50 | L | A | 0.0000 | |
51 | N | A | -1.2792 | |
52 | K | A | -2.0477 | |
53 | G | A | -2.2087 | |
54 | D | A | -2.6766 | |
55 | E | A | -3.1946 | |
56 | D | A | -2.4069 | |
57 | K | A | -1.3683 | |
58 | Y | A | 0.1791 | |
59 | Y | A | -0.4203 | |
60 | S | A | 0.0000 | |
61 | D | A | -2.3304 | |
62 | A | A | -1.6034 | |
63 | V | A | 0.0000 | |
64 | K | A | -2.5050 | |
65 | G | A | -1.8689 | |
66 | R | A | -1.9164 | |
67 | F | A | 0.0000 | |
68 | T | A | -1.0568 | |
69 | I | A | 0.0000 | |
70 | S | A | -0.9281 | |
71 | W | A | -1.3009 | |
72 | N | A | -1.9838 | |
73 | D | A | -3.0299 | |
74 | A | A | -1.7706 | |
75 | K | A | -2.6752 | |
76 | N | A | -2.4039 | |
77 | M | A | -1.4708 | |
78 | V | A | 0.0000 | |
79 | F | A | 0.0000 | |
80 | L | A | 0.0000 | |
81 | E | A | -1.8630 | |
82 | M | A | 0.0000 | |
83 | T | A | -1.6194 | |
84 | D | A | -2.1235 | |
85 | L | A | 0.0000 | |
86 | M | A | -0.7619 | |
87 | A | A | -0.8316 | |
88 | D | A | -1.7479 | |
89 | D | A | 0.0000 | |
90 | T | A | -0.5533 | |
91 | G | A | -0.8493 | |
92 | V | A | -0.4365 | |
93 | Y | A | 0.0000 | |
94 | Y | A | -0.0557 | |
95 | C | A | 0.0000 | |
96 | A | A | 0.0000 | |
97 | G | A | 0.0000 | |
98 | G | A | 0.0000 | |
99 | W | A | 1.8484 | |
100 | F | A | 2.5513 | |
101 | A | A | 0.0000 | |
102 | P | A | 1.1037 | |
103 | L | A | 0.0000 | |
104 | I | A | 2.1866 | |
105 | A | A | 1.3886 | |
106 | A | A | 0.0000 | |
107 | V | A | 1.0351 | |
108 | T | A | 0.7133 | |
109 | Y | A | 1.2698 | |
110 | G | A | 0.6817 | |
111 | S | A | 0.6733 | |
112 | P | A | 0.6957 | |
113 | F | A | 1.6655 | |
114 | E | A | 1.0000 | |
115 | Y | A | 0.0000 | |
116 | A | A | 0.5534 | |
117 | N | A | 0.0000 | |
118 | W | A | 0.0978 | |
119 | G | A | -0.5424 | |
120 | Q | A | -1.2108 | |
121 | G | A | -0.7018 | |
122 | T | A | -0.8159 | |
123 | Q | A | -1.1040 | |
124 | V | A | 0.0000 | |
125 | T | A | -0.1003 | |
126 | V | A | 0.0000 | |
127 | S | A | -0.4833 |