| Chain sequence(s) |
A: GCSALPSSITLTSNSKLVDLFTHFNGTKVTTKAAFACRQAELSELIQRYELGTLPGRPSTLTASFSGNTLTINCGEGGKSISFTVTITYPSSGTAPYPAIIGFGGGSIPQPAGVANINFNNDDIAKQTDISSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALELTPAAKIDTTKIGVTGCSRNGKGALVAGAFEKRIVLTIPQESGMGGSACWRISDYLKSQGKNIQTASEIVGEYPWFSTTFNSYVNNVTLLPFDHHSLAALIAPRGLFVIDNDIDWLGPQSCTGCMYAARRAWQALGVPDNMGYSQRGSHAHCAFPSSQQADLTAFVNKFLLGQSTNTAIFYSDFSPNESQWIDWTTPTLS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:01)
[INFO] Main: Simulation completed successfully. (00:05:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1393 | |
| 2 | C | A | 0.4489 | |
| 3 | S | A | -0.0967 | |
| 4 | A | A | -0.0484 | |
| 5 | L | A | -0.2031 | |
| 6 | P | A | -0.3461 | |
| 7 | S | A | -0.3513 | |
| 8 | S | A | -0.2099 | |
| 9 | I | A | 0.0801 | |
| 10 | T | A | 0.1374 | |
| 11 | L | A | 0.2620 | |
| 12 | T | A | -0.0950 | |
| 13 | S | A | -0.5954 | |
| 14 | N | A | -0.8106 | |
| 15 | S | A | -0.8590 | |
| 16 | K | A | -1.3810 | |
| 17 | L | A | 0.0000 | |
| 18 | V | A | -0.3964 | |
| 19 | D | A | -0.6768 | |
| 20 | L | A | 0.0000 | |
| 21 | F | A | 0.0000 | |
| 22 | T | A | -1.0258 | |
| 23 | H | A | -0.9436 | |
| 24 | F | A | -0.3749 | |
| 25 | N | A | -1.4578 | |
| 26 | G | A | -1.3729 | |
| 27 | T | A | -1.4168 | |
| 28 | K | A | -2.0277 | |
| 29 | V | A | 0.0000 | |
| 30 | T | A | -0.8571 | |
| 31 | T | A | -0.9141 | |
| 32 | K | A | -1.2961 | |
| 33 | A | A | -0.5081 | |
| 34 | A | A | -0.5834 | |
| 35 | F | A | 0.0000 | |
| 36 | A | A | -0.1801 | |
| 37 | C | A | 0.0022 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.3124 | |
| 40 | A | A | -0.2407 | |
| 41 | E | A | -0.3718 | |
| 42 | L | A | 0.0000 | |
| 43 | S | A | -0.7015 | |
| 44 | E | A | -1.2445 | |
| 45 | L | A | 0.0000 | |
| 46 | I | A | 0.0000 | |
| 47 | Q | A | -0.7665 | |
| 48 | R | A | -0.8290 | |
| 49 | Y | A | 0.0000 | |
| 50 | E | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | T | A | -0.3598 | |
| 54 | L | A | -0.2767 | |
| 55 | P | A | -0.5294 | |
| 56 | G | A | -1.3381 | |
| 57 | R | A | -2.1417 | |
| 58 | P | A | 0.0000 | |
| 59 | S | A | -0.9889 | |
| 60 | T | A | -0.8835 | |
| 61 | L | A | -0.2669 | |
| 62 | T | A | 0.1097 | |
| 63 | A | A | 0.0076 | |
| 64 | S | A | 0.0354 | |
| 65 | F | A | -0.1977 | |
| 66 | S | A | -0.5960 | |
| 67 | G | A | -0.9669 | |
| 68 | N | A | -1.1652 | |
| 69 | T | A | -0.7310 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.2874 | |
| 72 | I | A | 0.0000 | |
| 73 | N | A | -0.5265 | |
| 74 | C | A | 0.0000 | |
| 75 | G | A | -1.4317 | |
| 76 | E | A | -1.7293 | |
| 77 | G | A | -1.4991 | |
| 78 | G | A | -1.7398 | |
| 79 | K | A | -2.6383 | |
| 80 | S | A | -1.7910 | |
| 81 | I | A | 0.0000 | |
| 82 | S | A | -0.4240 | |
| 83 | F | A | 0.0000 | |
| 84 | T | A | -0.6143 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -0.7773 | |
| 87 | I | A | 0.0000 | |
| 88 | T | A | -0.3303 | |
| 89 | Y | A | -0.1546 | |
| 90 | P | A | -0.2200 | |
| 91 | S | A | -0.3438 | |
| 92 | S | A | -0.4630 | |
| 93 | G | A | -0.5266 | |
| 94 | T | A | -0.5110 | |
| 95 | A | A | -0.6041 | |
| 96 | P | A | -0.9644 | |
| 97 | Y | A | -0.5246 | |
| 98 | P | A | -0.4621 | |
| 99 | A | A | 0.0000 | |
| 100 | I | A | 0.0000 | |
| 101 | I | A | 0.0000 | |
| 102 | G | A | 0.0000 | |
| 103 | F | A | 0.0000 | |
| 104 | G | A | -1.3378 | |
| 105 | G | A | -0.9310 | |
| 106 | G | A | -0.5774 | |
| 107 | S | A | -0.2034 | |
| 108 | I | A | -0.0843 | |
| 109 | P | A | -0.4424 | |
| 110 | Q | A | -0.5890 | |
| 111 | P | A | -0.4349 | |
| 112 | A | A | -0.2170 | |
| 113 | G | A | 0.0000 | |
| 114 | V | A | 0.0000 | |
| 115 | A | A | 0.0000 | |
| 116 | N | A | -0.4368 | |
| 117 | I | A | 0.0000 | |
| 118 | N | A | -1.2413 | |
| 119 | F | A | 0.0000 | |
| 120 | N | A | -2.3986 | |
| 121 | N | A | 0.0000 | |
| 122 | D | A | -2.8183 | |
| 123 | D | A | -3.0267 | |
| 124 | I | A | 0.0000 | |
| 125 | A | A | 0.0000 | |
| 126 | K | A | -2.2542 | |
| 127 | Q | A | -1.5055 | |
| 128 | T | A | -0.8813 | |
| 129 | D | A | -0.9526 | |
| 130 | I | A | 0.2187 | |
| 131 | S | A | -0.4097 | |
| 132 | S | A | 0.0000 | |
| 133 | R | A | -0.8405 | |
| 134 | G | A | 0.0000 | |
| 135 | Q | A | -1.9656 | |
| 136 | G | A | -2.1852 | |
| 137 | K | A | -2.0529 | |
| 138 | F | A | 0.0000 | |
| 139 | Y | A | 0.0000 | |
| 140 | D | A | -2.4703 | |
| 141 | L | A | 0.0000 | |
| 142 | Y | A | -1.0230 | |
| 143 | G | A | -1.1778 | |
| 144 | S | A | -1.1273 | |
| 145 | S | A | -0.6134 | |
| 146 | H | A | -0.4782 | |
| 147 | S | A | -0.3690 | |
| 148 | A | A | 0.0000 | |
| 149 | G | A | 0.0000 | |
| 150 | A | A | 0.0000 | |
| 151 | M | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | A | A | 0.0000 | |
| 154 | W | A | 0.0000 | |
| 155 | A | A | 0.0000 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | 0.0000 | |
| 158 | V | A | 0.0000 | |
| 159 | S | A | -0.6950 | |
| 160 | R | A | 0.0000 | |
| 161 | V | A | 0.0000 | |
| 162 | I | A | 0.0000 | |
| 163 | D | A | 0.0000 | |
| 164 | A | A | 0.0000 | |
| 165 | L | A | 0.0000 | |
| 166 | E | A | -1.1922 | |
| 167 | L | A | 0.5967 | |
| 168 | T | A | -0.0974 | |
| 169 | P | A | -0.7365 | |
| 170 | A | A | -0.4751 | |
| 171 | A | A | 0.0000 | |
| 172 | K | A | -1.3706 | |
| 173 | I | A | 0.0000 | |
| 174 | D | A | -1.1661 | |
| 175 | T | A | -1.1079 | |
| 176 | T | A | -0.6813 | |
| 177 | K | A | -0.6247 | |
| 178 | I | A | 0.0000 | |
| 179 | G | A | 0.0000 | |
| 180 | V | A | 0.0000 | |
| 181 | T | A | 0.0000 | |
| 182 | G | A | 0.0000 | |
| 183 | C | A | 0.0000 | |
| 184 | S | A | -0.9029 | |
| 185 | R | A | -1.5778 | |
| 186 | N | A | -1.1540 | |
| 187 | G | A | 0.0000 | |
| 188 | K | A | 0.0000 | |
| 189 | G | A | 0.0000 | |
| 190 | A | A | 0.0000 | |
| 191 | L | A | 0.0000 | |
| 192 | V | A | 0.0000 | |
| 193 | A | A | 0.0000 | |
| 194 | G | A | 0.0000 | |
| 195 | A | A | 0.0000 | |
| 196 | F | A | 0.0000 | |
| 197 | E | A | 0.0000 | |
| 198 | K | A | -1.9565 | |
| 199 | R | A | -1.4382 | |
| 200 | I | A | 0.0000 | |
| 201 | V | A | -0.3402 | |
| 202 | L | A | 0.0000 | |
| 203 | T | A | 0.0000 | |
| 204 | I | A | 0.0000 | |
| 205 | P | A | 0.0000 | |
| 206 | Q | A | 0.0000 | |
| 207 | E | A | 0.0000 | |
| 208 | S | A | 0.0000 | |
| 209 | G | A | 0.0000 | |
| 210 | M | A | 0.0000 | |
| 211 | G | A | 0.0000 | |
| 212 | G | A | 0.0000 | |
| 213 | S | A | 0.0000 | |
| 214 | A | A | 0.0000 | |
| 215 | C | A | 0.0000 | |
| 216 | W | A | 0.0000 | |
| 217 | R | A | 0.0000 | |
| 218 | I | A | 0.0000 | |
| 219 | S | A | 0.0000 | |
| 220 | D | A | -2.1752 | |
| 221 | Y | A | -0.9576 | |
| 222 | L | A | 0.0000 | |
| 223 | K | A | -2.1925 | |
| 224 | S | A | -1.7197 | |
| 225 | Q | A | -2.1452 | |
| 226 | G | A | -1.8601 | |
| 227 | K | A | -2.3516 | |
| 228 | N | A | -2.1176 | |
| 229 | I | A | 0.0000 | |
| 230 | Q | A | 0.0000 | |
| 231 | T | A | 0.0000 | |
| 232 | A | A | 0.0000 | |
| 233 | S | A | -1.4466 | |
| 234 | E | A | -0.9919 | |
| 235 | I | A | 0.0000 | |
| 236 | V | A | -0.4296 | |
| 237 | G | A | -0.7999 | |
| 238 | E | A | -0.7068 | |
| 239 | Y | A | -0.4167 | |
| 240 | P | A | 0.0000 | |
| 241 | W | A | 0.0000 | |
| 242 | F | A | 0.0000 | |
| 243 | S | A | 0.0000 | |
| 244 | T | A | -0.6156 | |
| 245 | T | A | -0.6174 | |
| 246 | F | A | 0.0000 | |
| 247 | N | A | -1.6994 | |
| 248 | S | A | -1.1728 | |
| 249 | Y | A | -1.0194 | |
| 250 | V | A | 0.0000 | |
| 251 | N | A | -2.2362 | |
| 252 | N | A | -1.9180 | |
| 253 | V | A | 0.0000 | |
| 254 | T | A | -0.9084 | |
| 255 | L | A | -0.2545 | |
| 256 | L | A | 0.0000 | |
| 257 | P | A | 0.0964 | |
| 258 | F | A | 0.0000 | |
| 259 | D | A | 0.0000 | |
| 260 | H | A | 0.0000 | |
| 261 | H | A | 0.0000 | |
| 262 | S | A | 0.0000 | |
| 263 | L | A | 0.0000 | |
| 264 | A | A | 0.0000 | |
| 265 | A | A | 0.0000 | |
| 266 | L | A | 0.0000 | |
| 267 | I | A | 0.0000 | |
| 268 | A | A | 0.0000 | |
| 269 | P | A | -0.4459 | |
| 270 | R | A | -0.5118 | |
| 271 | G | A | 0.0000 | |
| 272 | L | A | 0.0000 | |
| 273 | F | A | 0.0000 | |
| 274 | V | A | 0.0000 | |
| 275 | I | A | 0.0000 | |
| 276 | D | A | 0.0000 | |
| 277 | N | A | 0.0000 | |
| 278 | D | A | -1.3524 | |
| 279 | I | A | -0.6243 | |
| 280 | D | A | -1.2970 | |
| 281 | W | A | -0.4522 | |
| 282 | L | A | 0.0000 | |
| 283 | G | A | 0.0000 | |
| 284 | P | A | 0.0000 | |
| 285 | Q | A | -0.7980 | |
| 286 | S | A | 0.0000 | |
| 287 | C | A | 0.0000 | |
| 288 | T | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | C | A | 0.0000 | |
| 291 | M | A | 0.0000 | |
| 292 | Y | A | 0.0814 | |
| 293 | A | A | 0.0000 | |
| 294 | A | A | 0.0000 | |
| 295 | R | A | -0.5182 | |
| 296 | R | A | -0.7204 | |
| 297 | A | A | 0.0000 | |
| 298 | W | A | 0.0000 | |
| 299 | Q | A | -1.3289 | |
| 300 | A | A | 0.0000 | |
| 301 | L | A | 0.0000 | |
| 302 | G | A | -0.9054 | |
| 303 | V | A | -0.4176 | |
| 304 | P | A | -0.7928 | |
| 305 | D | A | -0.8821 | |
| 306 | N | A | -0.7264 | |
| 307 | M | A | 0.0000 | |
| 308 | G | A | 0.0000 | |
| 309 | Y | A | 0.0000 | |
| 310 | S | A | 0.0000 | |
| 311 | Q | A | 0.0000 | |
| 312 | R | A | -1.2575 | |
| 313 | G | A | -1.2260 | |
| 314 | S | A | -1.1050 | |
| 315 | H | A | -0.5449 | |
| 316 | A | A | -0.2981 | |
| 317 | H | A | -0.5507 | |
| 318 | C | A | -0.0679 | |
| 319 | A | A | 0.0212 | |
| 320 | F | A | 0.0304 | |
| 321 | P | A | -0.4428 | |
| 322 | S | A | -0.6186 | |
| 323 | S | A | -0.7258 | |
| 324 | Q | A | 0.0000 | |
| 325 | Q | A | -1.0903 | |
| 326 | A | A | -0.5830 | |
| 327 | D | A | -0.5798 | |
| 328 | L | A | 0.0000 | |
| 329 | T | A | -0.5028 | |
| 330 | A | A | -0.7060 | |
| 331 | F | A | 0.0000 | |
| 332 | V | A | 0.0000 | |
| 333 | N | A | -0.7168 | |
| 334 | K | A | -0.9923 | |
| 335 | F | A | -0.3043 | |
| 336 | L | A | 0.0000 | |
| 337 | L | A | -0.2616 | |
| 338 | G | A | -0.9087 | |
| 339 | Q | A | -1.4201 | |
| 340 | S | A | -1.1057 | |
| 341 | T | A | -1.1759 | |
| 342 | N | A | -1.5854 | |
| 343 | T | A | 0.0000 | |
| 344 | A | A | -0.2424 | |
| 345 | I | A | 0.3038 | |
| 346 | F | A | 0.9091 | |
| 347 | Y | A | 0.5216 | |
| 348 | S | A | -0.6915 | |
| 349 | D | A | -1.8881 | |
| 350 | F | A | -0.8401 | |
| 351 | S | A | -0.7008 | |
| 352 | P | A | -0.8539 | |
| 353 | N | A | -1.2759 | |
| 354 | E | A | -1.4790 | |
| 355 | S | A | -1.3958 | |
| 356 | Q | A | -1.3873 | |
| 357 | W | A | 0.0000 | |
| 358 | I | A | 0.0000 | |
| 359 | D | A | -2.1036 | |
| 360 | W | A | -0.9330 | |
| 361 | T | A | -0.5050 | |
| 362 | T | A | -0.3879 | |
| 363 | P | A | -0.5569 | |
| 364 | T | A | -0.5953 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6378 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine