| Chain sequence(s) |
A: IVGGYTCAANSIPYQVSLNSGSHFCGGSLINSQWVVSAAHCYKSRIQVRLGEHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPRSCAAAGTECLISGWGNTKSSGSSYPSLLQCLKAPVLSNSSCKSSYPGQITGNMICVGFLQGGKDSCQGDSGGPVVCNGQLQGIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTIAAN
I: RICPRIWMECTRDSDCMAKCICVAGHCG input PDB |
| Selected Chain(s) | A,I |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:21)
[INFO] Main: Simulation completed successfully. (00:03:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 16 | I | A | 0.0000 | |
| 17 | V | A | 0.0000 | |
| 18 | G | A | -1.0787 | |
| 19 | G | A | -0.3533 | |
| 20 | Y | A | 0.8988 | |
| 21 | T | A | 0.5702 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1078 | |
| 24 | A | A | -0.5893 | |
| 25 | N | A | -1.3309 | |
| 26 | S | A | -0.6792 | |
| 27 | I | A | 0.0000 | |
| 28 | P | A | -0.3742 | |
| 29 | Y | A | 0.1854 | |
| 30 | Q | A | 0.0000 | |
| 31 | V | A | 0.0000 | |
| 32 | S | A | 0.0000 | |
| 33 | L | A | 0.0000 | |
| 34 | N | A | -0.9526 | |
| 37 | S | A | -1.1809 | |
| 38 | G | A | -0.9165 | |
| 39 | S | A | -0.4800 | |
| 40 | H | A | 0.0000 | |
| 41 | F | A | 0.0000 | |
| 42 | C | A | 0.0000 | |
| 43 | G | A | 0.0000 | |
| 44 | G | A | 0.0000 | |
| 45 | S | A | 0.0000 | |
| 46 | L | A | 0.0000 | |
| 47 | I | A | -0.0220 | |
| 48 | N | A | -0.3369 | |
| 49 | S | A | -0.3477 | |
| 50 | Q | A | -0.7863 | |
| 51 | W | A | 0.0000 | |
| 52 | V | A | 0.0000 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | A | A | 0.0000 | |
| 57 | H | A | 0.0000 | |
| 58 | C | A | 0.0000 | |
| 59 | Y | A | 0.3977 | |
| 60 | K | A | -1.0165 | |
| 61 | S | A | -1.3026 | |
| 62 | R | A | -2.3776 | |
| 63 | I | A | 0.0000 | |
| 64 | Q | A | -1.1772 | |
| 65 | V | A | 0.0000 | |
| 66 | R | A | -0.2577 | |
| 67 | L | A | 0.0000 | |
| 69 | G | A | 0.0000 | |
| 70 | E | A | 0.0000 | |
| 71 | H | A | -0.4251 | |
| 72 | N | A | 0.0748 | |
| 73 | I | A | -0.0241 | |
| 74 | D | A | -0.6051 | |
| 75 | V | A | 1.3277 | |
| 76 | L | A | 1.0673 | |
| 77 | E | A | -0.7315 | |
| 78 | G | A | -1.0259 | |
| 79 | N | A | -1.8803 | |
| 80 | E | A | -0.8567 | |
| 81 | Q | A | -0.4137 | |
| 82 | F | A | 0.3575 | |
| 83 | I | A | -0.4144 | |
| 84 | N | A | -1.6633 | |
| 85 | A | A | -1.2727 | |
| 86 | A | A | -1.0177 | |
| 87 | K | A | -0.9016 | |
| 88 | I | A | -0.0551 | |
| 89 | I | A | 0.4504 | |
| 90 | T | A | 0.1833 | |
| 91 | H | A | -0.4594 | |
| 92 | P | A | -0.7929 | |
| 93 | N | A | -1.4083 | |
| 94 | F | A | -0.8154 | |
| 95 | N | A | -1.2800 | |
| 96 | G | A | -1.1761 | |
| 97 | N | A | -1.7142 | |
| 98 | T | A | -0.9352 | |
| 99 | L | A | 0.0000 | |
| 100 | D | A | -0.9087 | |
| 101 | N | A | 0.0000 | |
| 102 | D | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | M | A | 0.0000 | |
| 105 | L | A | 0.0000 | |
| 106 | I | A | 0.0000 | |
| 107 | K | A | -1.0720 | |
| 108 | L | A | 0.0000 | |
| 109 | S | A | -0.9938 | |
| 110 | S | A | -0.7517 | |
| 111 | P | A | -0.5374 | |
| 112 | A | A | 0.0000 | |
| 113 | T | A | -0.0542 | |
| 114 | L | A | 0.3258 | |
| 115 | N | A | -0.7899 | |
| 116 | S | A | -0.9048 | |
| 117 | R | A | 0.0000 | |
| 118 | V | A | 0.0000 | |
| 119 | A | A | 0.0049 | |
| 120 | T | A | 0.0360 | |
| 121 | V | A | 0.0000 | |
| 122 | S | A | -0.5182 | |
| 123 | L | A | -0.3975 | |
| 124 | P | A | 0.0000 | |
| 125 | R | A | -1.7215 | |
| 127 | S | A | -0.7785 | |
| 128 | C | A | 0.0212 | |
| 129 | A | A | -0.3542 | |
| 130 | A | A | -0.2321 | |
| 132 | A | A | -0.4688 | |
| 133 | G | A | -0.8289 | |
| 134 | T | A | -1.2647 | |
| 135 | E | A | -2.4804 | |
| 136 | C | A | 0.0000 | |
| 137 | L | A | -0.9542 | |
| 138 | I | A | 0.0000 | |
| 139 | S | A | 0.0000 | |
| 140 | G | A | 0.0000 | |
| 141 | W | A | 0.0000 | |
| 142 | G | A | 0.0000 | |
| 143 | N | A | 0.0000 | |
| 144 | T | A | -0.7563 | |
| 145 | K | A | -1.6221 | |
| 146 | S | A | -1.3640 | |
| 147 | S | A | -0.9632 | |
| 148 | G | A | -0.8434 | |
| 149 | S | A | -0.6998 | |
| 150 | S | A | -0.5341 | |
| 151 | Y | A | 0.0419 | |
| 152 | P | A | -0.0941 | |
| 153 | S | A | -0.1070 | |
| 154 | L | A | 0.3608 | |
| 155 | L | A | 0.0000 | |
| 156 | Q | A | 0.2327 | |
| 157 | C | A | 0.0000 | |
| 158 | L | A | 0.0000 | |
| 159 | K | A | -2.0440 | |
| 160 | A | A | 0.0000 | |
| 161 | P | A | -1.1948 | |
| 162 | V | A | 0.0000 | |
| 163 | L | A | -0.3317 | |
| 164 | S | A | -0.8297 | |
| 165 | N | A | -1.6138 | |
| 166 | S | A | -1.1975 | |
| 167 | S | A | -0.9114 | |
| 168 | C | A | 0.0000 | |
| 169 | K | A | -1.6012 | |
| 170 | S | A | -1.2156 | |
| 171 | S | A | 0.0000 | |
| 172 | Y | A | 0.0000 | |
| 173 | P | A | -0.8789 | |
| 174 | G | A | -0.8902 | |
| 175 | Q | A | -0.7162 | |
| 176 | I | A | -0.7480 | |
| 177 | T | A | -0.6865 | |
| 178 | G | A | -0.8266 | |
| 179 | N | A | -0.6512 | |
| 180 | M | A | 0.0000 | |
| 181 | I | A | -0.2766 | |
| 182 | C | A | 0.0000 | |
| 183 | V | A | 0.0000 | |
| 184A | G | A | 0.0000 | |
| 184 | F | A | -0.7272 | |
| 185 | L | A | -1.2065 | |
| 186 | Q | A | -2.1655 | |
| 187 | G | A | -2.1701 | |
| 188A | G | A | -1.7872 | |
| 188 | K | A | -1.8581 | |
| 189 | D | A | 0.0000 | |
| 190 | S | A | 0.0000 | |
| 191 | C | A | 0.0000 | |
| 192 | Q | A | 0.0000 | |
| 193 | G | A | 0.0000 | |
| 194 | D | A | 0.0000 | |
| 195 | S | A | 0.0000 | |
| 196 | G | A | 0.0000 | |
| 197 | G | A | 0.0000 | |
| 198 | P | A | 0.0000 | |
| 199 | V | A | 0.0000 | |
| 200 | V | A | -0.6808 | |
| 201 | C | A | 0.0000 | |
| 202 | N | A | -1.8240 | |
| 203 | G | A | -1.0931 | |
| 204 | Q | A | -0.9898 | |
| 209 | L | A | 0.0000 | |
| 210 | Q | A | 0.0000 | |
| 211 | G | A | 0.0000 | |
| 212 | I | A | 0.0000 | |
| 213 | V | A | 0.0000 | |
| 214 | S | A | 0.0000 | |
| 215 | W | A | 0.0000 | |
| 216 | G | A | 0.0000 | |
| 217 | Y | A | -0.6050 | |
| 219 | G | A | -0.6243 | |
| 220 | C | A | -0.8940 | |
| 221A | A | A | -1.7045 | |
| 221 | Q | A | -2.2222 | |
| 222 | K | A | -3.0109 | |
| 223 | N | A | -2.0936 | |
| 224 | K | A | -1.5035 | |
| 225 | P | A | 0.0000 | |
| 226 | G | A | 0.0000 | |
| 227 | V | A | 0.0000 | |
| 228 | Y | A | 0.0000 | |
| 229 | T | A | 0.0000 | |
| 230 | K | A | -0.4054 | |
| 231 | V | A | 0.0000 | |
| 232 | C | A | -0.5017 | |
| 233 | N | A | -0.7001 | |
| 234 | Y | A | 0.0000 | |
| 235 | V | A | -0.9352 | |
| 236 | N | A | -1.7605 | |
| 237 | W | A | -1.1201 | |
| 238 | I | A | 0.0000 | |
| 239 | Q | A | -1.8972 | |
| 240 | Q | A | -2.0327 | |
| 241 | T | A | 0.0000 | |
| 242 | I | A | -1.0689 | |
| 243 | A | A | -0.8544 | |
| 244 | A | A | -0.8631 | |
| 245 | N | A | -1.3221 | |
| 1 | R | I | -1.1828 | |
| 2 | I | I | 0.0000 | |
| 3 | C | I | 0.0000 | |
| 4 | P | I | 0.0000 | |
| 5 | R | I | 0.0000 | |
| 6 | I | I | 0.0000 | |
| 7 | W | I | -0.1940 | |
| 8 | M | I | -0.9535 | |
| 9 | E | I | -2.1370 | |
| 10 | C | I | 0.0000 | |
| 11 | T | I | -1.8258 | |
| 12 | R | I | -3.1354 | |
| 13 | D | I | -2.8395 | |
| 14 | S | I | -2.3750 | |
| 15 | D | I | -2.8978 | |
| 16 | C | I | -1.6136 | |
| 17 | M | I | -0.8041 | |
| 18 | A | I | -1.1610 | |
| 19 | K | I | -1.8567 | |
| 20 | C | I | 0.0000 | |
| 21 | I | I | -0.3389 | |
| 22 | C | I | -0.7186 | |
| 23 | V | I | 1.0936 | |
| 24 | A | I | 0.3081 | |
| 25 | G | I | -0.9202 | |
| 26 | H | I | -1.0079 | |
| 27 | C | I | 0.0000 | |
| 28 | G | I | -0.0719 |