| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPLHEAADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGHPLPDAPPPSPLYTPPPPTSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQVCTPEPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9487 | |
| 2 | L | A | 1.9701 | |
| 3 | P | A | 0.6473 | |
| 4 | P | A | 0.3672 | |
| 5 | T | A | 0.1196 | |
| 6 | T | A | 0.1313 | |
| 7 | P | A | 0.1928 | |
| 8 | V | A | 1.2209 | |
| 9 | A | A | 0.0357 | |
| 10 | K | A | -1.1626 | |
| 11 | V | A | -0.4123 | |
| 12 | Q | A | -1.5414 | |
| 13 | S | A | -1.6141 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4294 | |
| 16 | E | A | -2.4474 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4566 | |
| 20 | P | A | 0.1283 | |
| 21 | T | A | 0.1655 | |
| 22 | S | A | -0.0950 | |
| 23 | L | A | 0.0965 | |
| 24 | F | A | -0.0227 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1639 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7301 | |
| 31 | R | A | -2.6119 | |
| 32 | L | A | -0.7564 | |
| 33 | L | A | 1.2293 | |
| 34 | T | A | 1.4677 | |
| 35 | V | A | 2.0172 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1879 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6170 | |
| 40 | K | A | -1.6343 | |
| 41 | D | A | -0.9284 | |
| 42 | I | A | 0.8228 | |
| 43 | V | A | 1.0151 | |
| 44 | K | A | -1.1919 | |
| 45 | N | A | -1.9298 | |
| 46 | G | A | -1.2336 | |
| 47 | K | A | -0.9478 | |
| 48 | V | A | 1.5035 | |
| 49 | V | A | 2.0645 | |
| 50 | V | A | 1.2991 | |
| 51 | P | A | 0.4905 | |
| 52 | K | A | -0.6175 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1737 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4995 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2677 | |
| 70 | K | A | -1.8120 | |
| 71 | F | A | -0.6644 | |
| 72 | A | A | -0.5740 | |
| 73 | L | A | -0.8486 | |
| 74 | P | A | -1.2442 | |
| 75 | Q | A | -2.4804 | |
| 76 | K | A | -3.0963 | |
| 77 | D | A | -2.9925 | |
| 78 | F | A | -1.6499 | |
| 79 | Y | A | -1.9360 | |
| 80 | D | A | -2.7692 | |
| 81 | P | A | -2.3469 | |
| 82 | E | A | -3.0683 | |
| 83 | K | A | -3.4379 | |
| 84 | E | A | -2.4989 | |
| 85 | R | A | -1.3149 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6338 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9654 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3261 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6772 | |
| 99 | G | A | -0.5268 | |
| 100 | P | A | -0.4112 | |
| 101 | L | A | 0.0260 | |
| 102 | G | A | -0.2762 | |
| 103 | K | A | -0.7684 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4677 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1593 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4447 | |
| 110 | L | A | 0.4259 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9701 | |
| 113 | K | A | -0.4313 | |
| 114 | L | A | -0.9131 | |
| 115 | G | A | -0.8156 | |
| 116 | D | A | -1.0589 | |
| 117 | T | A | -0.8277 | |
| 118 | E | A | -1.9395 | |
| 119 | N | A | -2.0273 | |
| 120 | P | A | -1.2884 | |
| 121 | T | A | -0.6677 | |
| 122 | A | A | -0.3560 | |
| 123 | P | A | -0.1530 | |
| 124 | L | A | -0.3591 | |
| 125 | H | A | -1.3876 | |
| 126 | E | A | -2.4217 | |
| 127 | A | A | -1.5741 | |
| 128 | A | A | -1.2390 | |
| 129 | D | A | -2.0449 | |
| 130 | V | A | -1.3724 | |
| 131 | R | A | -0.7704 | |
| 132 | V | A | 0.4036 | |
| 133 | A | A | 0.4507 | |
| 134 | F | A | 0.2858 | |
| 135 | S | A | -0.0674 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5606 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2459 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5693 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2540 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0718 | |
| 157 | D | A | 0.3068 | |
| 158 | I | A | 0.8063 | |
| 159 | A | A | 0.0962 | |
| 160 | E | A | -1.4871 | |
| 161 | P | A | -0.2446 | |
| 162 | C | A | 0.1836 | |
| 163 | P | A | -0.1671 | |
| 164 | G | A | -0.0671 | |
| 165 | L | A | 0.6066 | |
| 166 | P | A | -0.1006 | |
| 167 | P | A | -0.3342 | |
| 168 | G | A | -0.4122 | |
| 169 | A | A | -0.0095 | |
| 170 | C | A | 0.7546 | |
| 171 | P | A | 0.5407 | |
| 172 | P | A | 0.7996 | |
| 173 | I | A | 2.0140 | |
| 174 | Q | A | 0.8197 | |
| 175 | L | A | 1.4132 | |
| 176 | V | A | 0.8059 | |
| 177 | N | A | -0.3117 | |
| 178 | S | A | 0.0182 | |
| 179 | V | A | 0.4232 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3809 | |
| 182 | D | A | 0.0813 | |
| 183 | G | A | -0.1588 | |
| 184 | D | A | -0.5770 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1429 | |
| 190 | F | A | 0.0556 | |
| 191 | G | A | -0.1050 | |
| 192 | N | A | -0.3049 | |
| 193 | M | A | -0.1881 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4329 | |
| 197 | E | A | -2.6392 | |
| 198 | L | A | -1.2426 | |
| 199 | Q | A | -2.5467 | |
| 200 | Q | A | -3.3515 | |
| 201 | D | A | -3.6055 | |
| 202 | R | A | -3.3378 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2182 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3802 | |
| 211 | S | A | -1.9086 | |
| 212 | T | A | -1.5027 | |
| 213 | R | A | -2.2376 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1837 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3124 | |
| 220 | L | A | 0.5270 | |
| 221 | K | A | -1.2479 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9384 | |
| 224 | N | A | -1.5461 | |
| 225 | E | A | -1.2890 | |
| 226 | A | A | -0.7988 | |
| 227 | Y | A | -0.4382 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7017 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1424 | |
| 234 | F | A | 0.0278 | |
| 235 | G | A | -0.9431 | |
| 236 | R | A | -2.7307 | |
| 237 | R | A | -3.0625 | |
| 238 | E | A | -2.2605 | |
| 239 | Q | A | -0.1956 | |
| 240 | V | A | 1.5047 | |
| 241 | Y | A | 1.2320 | |
| 242 | A | A | 0.1334 | |
| 243 | R | A | -1.3151 | |
| 244 | H | A | -1.0829 | |
| 245 | F | A | -0.0221 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4873 | |
| 249 | A | A | -1.1494 | |
| 250 | G | A | -1.0604 | |
| 251 | P | A | -1.1495 | |
| 252 | D | A | -1.4444 | |
| 253 | G | A | -1.2746 | |
| 254 | H | A | -1.4659 | |
| 255 | P | A | -1.4091 | |
| 256 | L | A | -0.5283 | |
| 257 | P | A | -0.8937 | |
| 258 | D | A | -1.9107 | |
| 259 | A | A | -0.9022 | |
| 260 | P | A | -0.9306 | |
| 261 | P | A | -0.6319 | |
| 262 | P | A | -0.3227 | |
| 263 | S | A | -0.1903 | |
| 264 | P | A | 0.4192 | |
| 265 | L | A | 1.4800 | |
| 266 | Y | A | 0.6003 | |
| 267 | T | A | 0.0591 | |
| 268 | P | A | -0.3562 | |
| 269 | P | A | 0.0584 | |
| 270 | P | A | -0.3200 | |
| 271 | P | A | -0.0549 | |
| 272 | T | A | -0.1606 | |
| 273 | S | A | 0.3374 | |
| 274 | P | A | 0.4593 | |
| 275 | Y | A | 1.4044 | |
| 276 | A | A | 0.9665 | |
| 277 | V | A | 1.5751 | |
| 278 | R | A | 0.3073 | |
| 279 | P | A | -0.3261 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.5468 | |
| 282 | D | A | -0.7198 | |
| 283 | Y | A | 0.9841 | |
| 284 | F | A | 0.7442 | |
| 285 | G | A | 0.1773 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7897 | |
| 291 | L | A | 1.6012 | |
| 292 | V | A | 0.5974 | |
| 293 | S | A | -0.1589 | |
| 294 | S | A | -0.9659 | |
| 295 | D | A | -1.8436 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1450 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6320 | |
| 301 | R | A | -1.8532 | |
| 302 | P | A | -0.9677 | |
| 303 | F | A | -0.1852 | |
| 304 | W | A | -0.5206 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0818 | |
| 307 | R | A | -2.9243 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6576 | |
| 310 | G | A | -1.4170 | |
| 311 | N | A | -1.3951 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9810 | |
| 319 | N | A | -0.9114 | |
| 320 | E | A | -1.0707 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3592 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1780 | |
| 333 | N | A | 0.4321 | |
| 334 | F | A | 1.5059 | |
| 335 | T | A | 0.6885 | |
| 336 | I | A | 0.3885 | |
| 337 | S | A | -1.0688 | |
| 338 | Q | A | -1.8608 | |
| 339 | Q | A | -1.4440 | |
| 340 | V | A | 0.4578 | |
| 341 | C | A | 0.1445 | |
| 342 | T | A | -0.3201 | |
| 343 | P | A | -0.6059 | |
| 344 | E | A | -1.6025 | |
| 345 | P | A | -1.0649 | |
| 346 | N | A | -0.7924 | |
| 347 | V | A | 0.9086 | |
| 348 | Y | A | 1.1011 | |
| 349 | D | A | -0.1330 | |
| 350 | P | A | -0.6077 | |
| 351 | S | A | -0.4451 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -1.0590 | |
| 354 | K | A | -2.2603 | |
| 355 | N | A | -1.8812 | |
| 356 | Y | A | 0.0012 | |
| 357 | L | A | 0.6783 | |
| 358 | R | A | 0.9641 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4779 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0218 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9371 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6811 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2767 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3205 | |
| 376 | L | A | -1.7496 | |
| 377 | D | A | -2.0207 | |
| 378 | P | A | -1.0564 | |
| 379 | G | A | -1.0181 | |
| 380 | V | A | -0.9309 | |
| 381 | L | A | -0.5413 | |
| 382 | A | A | -0.6634 | |
| 383 | H | A | -0.8536 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4088 | |
| 386 | T | A | -0.5786 | |
| 387 | M | A | -0.3327 | |
| 388 | N | A | -0.8745 | |
| 389 | P | A | -1.2957 | |
| 390 | T | A | -1.6289 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5881 | |
| 393 | E | A | -3.0329 | |
| 394 | N | A | -2.8683 | |
| 395 | W | A | -1.6070 | |
| 396 | N | A | -1.4110 | |
| 397 | L | A | -0.2358 | |
| 398 | G | A | 0.5230 | |
| 399 | F | A | 2.4249 | |
| 400 | V | A | 1.8446 | |
| 401 | P | A | 0.0442 | |
| 402 | P | A | -2.0201 | |
| 403 | K | A | -3.6534 | |
| 404 | E | A | -4.0823 | |
| 405 | R | A | -4.6130 | |
| 406 | E | A | -4.0852 | |
| 407 | D | A | -2.9874 | |
| 408 | P | A | -1.8246 | |
| 409 | Y | A | -0.9696 | |
| 410 | K | A | -2.0925 | |
| 411 | G | A | -0.6278 | |
| 412 | L | A | 0.6750 | |
| 413 | I | A | 1.5817 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4076 | |
| 416 | E | A | -1.6983 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8580 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8855 | |
| 421 | E | A | -2.4791 | |
| 422 | R | A | -1.9576 | |
| 423 | F | A | -1.0047 | |
| 424 | S | A | -1.3215 | |
| 425 | Q | A | -1.7705 | |
| 426 | D | A | -2.9699 | |
| 427 | L | A | -2.1789 | |
| 428 | D | A | -3.0446 | |
| 429 | Q | A | -2.7532 | |
| 430 | F | A | -1.6449 | |
| 431 | A | A | -1.1483 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2695 | |
| 435 | K | A | -1.1198 | |
| 436 | F | A | -0.1055 | |
| 437 | L | A | 0.7876 | |
| 438 | Y | A | 0.6264 | |
| 439 | Q | A | -0.3804 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine