Project name: query_structure

Status: done

Started: 2026-03-16 23:43:23
Settings
Chain sequence(s) A: GTCNTPGCSCSSWPICTRDGLPTCGETCFG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:06)
Show buried residues

Minimal score value
-1.8231
Maximal score value
1.7136
Average score
-0.2268
Total score value
-6.8029

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5973
2 T A -0.5371
3 C A -0.7226
4 N A -1.6289
5 T A -1.0549
6 P A -0.7784
7 G A -0.6993
8 C A -0.3091
9 S A -0.2518
10 C A 0.2946
11 S A -0.0845
12 S A 0.3164
13 W A 1.0521
14 P A 0.3779
15 I A 1.4588
16 C A 0.7936
17 T A -0.4763
18 R A -1.7092
19 D A -1.8231
20 G A -0.8571
21 L A 0.6140
22 P A -0.1093
23 T A -0.4317
24 C A -0.3582
25 G A -1.3818
26 E A -1.6864
27 T A -0.0206
28 C A 1.4171
29 F A 1.7136
30 G A 0.6766
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Laboratory of Theory of Biopolymers 2018