Project name: 22-1.PDB

Status: done

Started: 2026-03-19 06:10:55
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASGSISSHNDMSWYRQAPGKQLELVAFIASGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCNSRTYDGEKTYWGQGTTVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:04)
Show buried residues

Minimal score value
-3.0731
Maximal score value
1.2153
Average score
-0.6813
Total score value
-79.7138

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.6075
2 V H -1.1514
3 Q H -1.0627
4 L H 0.0000
5 V H 1.2153
6 E H 0.0000
7 S H -0.3024
8 G H -0.9632
9 G H -0.3485
11 G H 0.3067
12 L H 1.1913
13 V H -0.0246
14 Q H -1.3718
15 P H -1.4461
16 G H -1.4461
17 G H -0.9700
18 S H -0.9683
19 L H -0.7242
20 R H -1.7548
21 L H 0.0000
22 S H -0.2212
23 C H 0.0000
24 A H 0.0511
25 A H -0.3265
26 S H -0.6127
27 G H -0.7887
28 S H -0.8857
29 I H 0.0000
30 S H -1.4367
35 S H -1.2175
36 H H -1.4113
37 N H -1.1107
38 D H -1.0018
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 Y H 0.6416
43 R H 0.0000
44 Q H -0.7011
45 A H 0.0000
46 P H -0.8787
47 G H -1.2380
48 K H -1.7041
49 Q H -1.5297
50 L H -0.1583
51 E H -0.2432
52 L H 0.7352
53 V H 0.0000
54 A H 0.0000
55 F H 0.6274
56 I H 0.0000
57 A H -0.7047
58 S H -1.2637
59 G H -1.0269
63 G H -0.6333
64 S H -0.2110
65 T H 0.4379
66 Y H 1.0683
67 Y H -0.0002
68 A H -0.7962
69 D H -2.2715
70 S H -1.6860
71 V H 0.0000
72 K H -2.3593
74 G H -1.6848
75 R H -1.4720
76 F H 0.0000
77 T H -0.6386
78 I H 0.0000
79 S H -0.5025
80 R H -1.1984
81 D H -1.8415
82 N H -2.3915
83 S H -1.8762
84 K H -2.4768
85 N H -1.8702
86 T H 0.0000
87 L H 0.0000
88 Y H -0.3997
89 L H 0.0000
90 Q H -1.1628
91 M H 0.0000
92 N H -1.3107
93 S H -1.2291
94 L H 0.0000
95 R H -2.2300
96 A H -1.6677
97 E H -2.1853
98 D H 0.0000
99 T H -0.6479
100 A H 0.0000
101 V H 0.2383
102 Y H 0.0000
103 Y H 0.5429
104 C H 0.0000
105 N H 0.0000
106 S H 0.0000
107 R H -1.6931
108 T H -1.5679
109 Y H -1.4621
110 D H -2.3348
113 G H -2.4305
114 E H -3.0731
115 K H -2.9021
116 T H -1.2549
117 Y H -0.7560
118 W H 0.1697
119 G H 0.0169
120 Q H -0.7586
121 G H -0.1298
122 T H -0.1008
123 T H 0.0099
124 V H 0.0000
125 T H 0.0118
126 V H 0.0000
127 S H -0.5923
128 S H -0.5761
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Laboratory of Theory of Biopolymers 2018