| Chain sequence(s) |
A: VGINVKCKHSRQCLKPCKDAGMRFGKCTNGKCHCTPK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.5579 | |
| 2 | G | A | 0.6270 | |
| 3 | I | A | 0.0355 | |
| 4 | N | A | -0.9896 | |
| 5 | V | A | -0.5961 | |
| 6 | K | A | -2.5085 | |
| 7 | C | A | 0.0000 | |
| 8 | K | A | -3.1247 | |
| 9 | H | A | -2.9470 | |
| 10 | S | A | -2.7101 | |
| 11 | R | A | -3.2089 | |
| 12 | Q | A | -3.1391 | |
| 13 | C | A | 0.0000 | |
| 14 | L | A | -2.1571 | |
| 15 | K | A | -3.0837 | |
| 16 | P | A | -2.0347 | |
| 17 | C | A | 0.0000 | |
| 18 | K | A | -2.8339 | |
| 19 | D | A | -3.0764 | |
| 20 | A | A | -1.7492 | |
| 21 | G | A | -1.8539 | |
| 22 | M | A | -1.7240 | |
| 23 | R | A | -2.3309 | |
| 24 | F | A | -0.3760 | |
| 25 | G | A | -1.2186 | |
| 26 | K | A | -1.9853 | |
| 27 | C | A | -2.2959 | |
| 28 | T | A | -1.6567 | |
| 29 | N | A | -2.0102 | |
| 30 | G | A | -2.0224 | |
| 31 | K | A | -2.4887 | |
| 32 | C | A | 0.0000 | |
| 33 | H | A | -0.6926 | |
| 34 | C | A | 0.0000 | |
| 35 | T | A | -0.4786 | |
| 36 | P | A | -1.1547 | |
| 37 | K | A | -2.1913 |