Project name: query_structure

Status: done

Started: 2026-03-16 23:31:04
Settings
Chain sequence(s) A: GSIPACGESCFKGKCYTPGCTCSKYPLCAKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:21)
Show buried residues

Minimal score value
-2.1195
Maximal score value
1.4612
Average score
-0.3845
Total score value
-11.9208

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4741
2 S A 0.1259
3 I A 1.4612
4 P A 0.2484
5 A A -0.2721
6 C A -0.3812
7 G A -0.4375
8 E A -0.3343
9 S A 0.1283
10 C A 0.0000
11 F A 0.8569
12 K A -1.3146
13 G A -1.2039
14 K A -1.5471
15 C A -0.4275
16 Y A 0.7440
17 T A -0.1030
18 P A -0.3098
19 G A -1.0924
20 C A -1.2061
21 T A -1.0373
22 C A -0.4993
23 S A -0.5592
24 K A -0.9567
25 Y A 0.9199
26 P A 0.5100
27 L A 0.2887
28 C A 0.0000
29 A A -0.8739
30 K A -2.0546
31 N A -2.1195
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Laboratory of Theory of Biopolymers 2018