| Chain sequence(s) |
H: DVQLVESGGGLVQPGGSRKLSCAASGFTFSRFGMHWIRQSPEKGLEWVAYISSGSTTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAIYYCARSGYDGYPFANWGQGTLVTVTA
L: DIFLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNVSPRLLIKYASESMSGIPSRFSGSGSGTDFTLTINSVESEDIADYYCQHTNNWPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:47)
[INFO] Main: Simulation completed successfully. (00:02:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | H | -2.0559 | |
| 2 | V | H | -1.2952 | |
| 3 | Q | H | -1.4614 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7480 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1423 | |
| 8 | G | H | -0.5076 | |
| 9 | G | H | 0.2420 | |
| 11 | G | H | 0.8809 | |
| 12 | L | H | 1.3192 | |
| 13 | V | H | -0.1666 | |
| 14 | Q | H | -1.3327 | |
| 15 | P | H | -1.5101 | |
| 16 | G | H | -1.3387 | |
| 17 | G | H | -1.0518 | |
| 18 | S | H | -1.4007 | |
| 19 | R | H | -1.4429 | |
| 20 | K | H | -1.9086 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3273 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2389 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0820 | |
| 27 | G | H | -1.3024 | |
| 28 | F | H | -0.8064 | |
| 29 | T | H | -0.7219 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.4943 | |
| 36 | R | H | -1.8369 | |
| 37 | F | H | 0.0000 | |
| 38 | G | H | -0.2928 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5710 | |
| 45 | S | H | 0.0000 | |
| 46 | P | H | -1.5519 | |
| 47 | E | H | -2.8425 | |
| 48 | K | H | -2.8852 | |
| 49 | G | H | -1.7281 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8072 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | Y | H | 0.6647 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | -0.2872 | |
| 58 | S | H | -1.0795 | |
| 59 | G | H | -0.9102 | |
| 62 | S | H | -0.3852 | |
| 63 | T | H | -0.1365 | |
| 64 | T | H | 0.3638 | |
| 65 | I | H | 1.1004 | |
| 66 | Y | H | 0.7663 | |
| 67 | Y | H | -0.3736 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.4133 | |
| 70 | T | H | -1.6434 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5017 | |
| 74 | G | H | -1.6725 | |
| 75 | R | H | -1.3814 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6653 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2604 | |
| 80 | R | H | -0.9434 | |
| 81 | D | H | -1.4391 | |
| 82 | N | H | -1.8544 | |
| 83 | P | H | -1.5928 | |
| 84 | K | H | -2.3888 | |
| 85 | N | H | -1.8476 | |
| 86 | T | H | -0.9783 | |
| 87 | L | H | 0.0000 | |
| 88 | F | H | -0.3710 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.5387 | |
| 91 | M | H | 0.0000 | |
| 92 | T | H | -1.1375 | |
| 93 | S | H | -1.1006 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.0686 | |
| 96 | S | H | -1.6581 | |
| 97 | E | H | -1.9055 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.2012 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 1.1051 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | S | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | Y | H | 0.1100 | |
| 110 | D | H | -1.2379 | |
| 112 | G | H | -0.6884 | |
| 113 | Y | H | -0.2851 | |
| 114 | P | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | A | H | -0.2278 | |
| 117 | N | H | -0.6992 | |
| 118 | W | H | -0.3966 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.6525 | |
| 121 | G | H | 0.2004 | |
| 122 | T | H | 0.7005 | |
| 123 | L | H | 1.7591 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.4791 | |
| 126 | V | H | 0.0000 | |
| 127 | T | H | -0.2980 | |
| 128 | A | H | -0.2166 | |
| 1 | D | L | -1.6089 | |
| 2 | I | L | 0.0000 | |
| 3 | F | L | 0.9260 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.4288 | |
| 6 | Q | L | -0.3620 | |
| 7 | S | L | -0.3499 | |
| 8 | P | L | 0.1620 | |
| 9 | A | L | 0.3926 | |
| 10 | I | L | 1.1229 | |
| 11 | L | L | 0.3130 | |
| 12 | S | L | -0.2872 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.8108 | |
| 15 | P | L | -2.0793 | |
| 16 | G | L | -2.3235 | |
| 17 | E | L | -3.1567 | |
| 18 | R | L | -3.3063 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.8641 | |
| 21 | F | L | 0.0000 | |
| 22 | S | L | -0.6795 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.7423 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.8095 | |
| 27 | Q | L | -1.5786 | |
| 28 | S | L | -1.4792 | |
| 29 | I | L | 0.0000 | |
| 36 | G | L | -1.1558 | |
| 37 | T | L | -0.8731 | |
| 38 | D | L | -1.0929 | |
| 39 | I | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | R | L | -1.0072 | |
| 46 | T | L | -0.5094 | |
| 47 | N | L | -1.0759 | |
| 48 | V | L | -0.0579 | |
| 49 | S | L | -0.4521 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.1025 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | K | L | -0.8132 | |
| 56 | Y | L | -0.6517 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -1.3335 | |
| 66 | E | L | -2.0509 | |
| 67 | S | L | -1.1953 | |
| 68 | M | L | -0.6205 | |
| 69 | S | L | -0.5794 | |
| 70 | G | L | -0.4822 | |
| 71 | I | L | -0.3063 | |
| 72 | P | L | -0.3129 | |
| 74 | S | L | -0.6397 | |
| 75 | R | L | -1.2696 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.9876 | |
| 78 | G | L | -0.7868 | |
| 79 | S | L | -0.8149 | |
| 80 | G | L | -0.9610 | |
| 83 | S | L | -1.0524 | |
| 84 | G | L | -1.2551 | |
| 85 | T | L | -1.5661 | |
| 86 | D | L | -1.8057 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6620 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.9412 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.7817 | |
| 93 | S | L | -2.6116 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -2.4100 | |
| 96 | S | L | -1.6321 | |
| 97 | E | L | -1.9551 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | 0.1258 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -0.5264 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | H | L | 0.0000 | |
| 107 | T | L | -0.8789 | |
| 108 | N | L | -1.6464 | |
| 109 | N | L | -1.8786 | |
| 114 | W | L | -0.7186 | |
| 115 | P | L | -0.9184 | |
| 116 | W | L | -0.4177 | |
| 117 | T | L | -0.2254 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.9997 | |
| 121 | G | L | -0.6183 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.4672 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.5858 | |
| 126 | I | L | -0.9355 | |
| 127 | K | L | -1.7749 |