| Chain sequence(s) |
A: YADAIFTNSYRKVLGQLSARKLLQDIMSR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.3957 | |
| 2 | A | A | 0.7510 | |
| 3 | D | A | -0.3691 | |
| 4 | A | A | 0.7457 | |
| 5 | I | A | 1.7907 | |
| 6 | F | A | 1.7462 | |
| 7 | T | A | 0.1612 | |
| 8 | N | A | -0.6423 | |
| 9 | S | A | 0.2070 | |
| 10 | Y | A | 0.8985 | |
| 11 | R | A | -1.2821 | |
| 12 | K | A | -1.4367 | |
| 13 | V | A | 0.9046 | |
| 14 | L | A | 0.4519 | |
| 15 | G | A | -0.7951 | |
| 16 | Q | A | -0.9709 | |
| 17 | L | A | 0.3745 | |
| 18 | S | A | -0.2931 | |
| 19 | A | A | -0.5000 | |
| 20 | R | A | -1.6012 | |
| 21 | K | A | -1.3463 | |
| 22 | L | A | 0.9989 | |
| 23 | L | A | 1.4937 | |
| 24 | Q | A | -0.5184 | |
| 25 | D | A | -0.2356 | |
| 26 | I | A | 1.6774 | |
| 27 | M | A | 1.2063 | |
| 28 | S | A | -0.1484 | |
| 29 | R | A | -1.3210 |