| Chain sequence(s) |
A: MDKKNGFVLFFLVLLLSPHNIMAVNEEIKERHTRQVAIPPVFVGAVVSPYVFLALLALYGASVLIANRVQKASSDSHSCANNRGWCRSSCFSHEYVDWYYTAVCGGYFCCRPK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | EA94A,RA87A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 5.49602 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:01:58)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:19)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:04)
[INFO] Main: Simulation completed successfully. (00:03:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.5930 | |
| 2 | D | A | -2.9933 | |
| 3 | K | A | -3.2160 | |
| 4 | K | A | -2.8856 | |
| 5 | N | A | -1.8043 | |
| 6 | G | A | -0.1029 | |
| 7 | F | A | 2.2641 | |
| 8 | V | A | 2.6118 | |
| 9 | L | A | 4.0087 | |
| 10 | F | A | 5.3532 | |
| 11 | F | A | 5.7636 | |
| 12 | L | A | 5.3630 | |
| 13 | V | A | 5.3397 | |
| 14 | L | A | 4.8735 | |
| 15 | L | A | 4.5465 | |
| 16 | L | A | 3.4908 | |
| 17 | S | A | 1.5333 | |
| 18 | P | A | 0.6538 | |
| 19 | H | A | -0.6937 | |
| 20 | N | A | -0.5844 | |
| 21 | I | A | 1.0671 | |
| 22 | M | A | 0.5713 | |
| 23 | A | A | -0.2025 | |
| 24 | V | A | 0.1405 | |
| 25 | N | A | -1.0412 | |
| 26 | E | A | -2.9136 | |
| 27 | E | A | -3.2765 | |
| 28 | I | A | -2.1547 | |
| 29 | K | A | -3.9228 | |
| 30 | E | A | -4.5454 | |
| 31 | R | A | -4.2471 | |
| 32 | H | A | -3.3374 | |
| 33 | T | A | -2.6701 | |
| 34 | R | A | -2.6173 | |
| 35 | Q | A | -1.5332 | |
| 36 | V | A | 0.4800 | |
| 37 | A | A | 0.0677 | |
| 38 | I | A | 0.0000 | |
| 39 | P | A | 0.3217 | |
| 40 | P | A | 0.3373 | |
| 41 | V | A | 0.0000 | |
| 42 | F | A | 0.4794 | |
| 43 | V | A | 1.0211 | |
| 44 | G | A | -0.4772 | |
| 45 | A | A | -0.6050 | |
| 46 | V | A | -0.6219 | |
| 47 | V | A | 0.0000 | |
| 48 | S | A | 0.0000 | |
| 49 | P | A | 0.3240 | |
| 50 | Y | A | 1.5479 | |
| 51 | V | A | 0.0000 | |
| 52 | F | A | 1.1324 | |
| 53 | L | A | 2.2510 | |
| 54 | A | A | 1.7650 | |
| 55 | L | A | 0.0000 | |
| 56 | L | A | 1.8496 | |
| 57 | A | A | 1.5344 | |
| 58 | L | A | 2.2620 | |
| 59 | Y | A | 1.4969 | |
| 60 | G | A | 1.2367 | |
| 61 | A | A | 1.0479 | |
| 62 | S | A | 0.4574 | |
| 63 | V | A | 0.9855 | |
| 64 | L | A | 0.0000 | |
| 65 | I | A | 1.1999 | |
| 66 | A | A | 0.4887 | |
| 67 | N | A | -0.1936 | |
| 68 | R | A | -1.3353 | |
| 69 | V | A | 0.0000 | |
| 70 | Q | A | -1.7066 | |
| 71 | K | A | -1.8624 | |
| 72 | A | A | 0.0000 | |
| 73 | S | A | -0.8277 | |
| 74 | S | A | -0.6017 | |
| 75 | D | A | -0.5127 | |
| 76 | S | A | -0.3543 | |
| 77 | H | A | -0.4176 | |
| 78 | S | A | -0.8426 | |
| 79 | C | A | 0.0000 | |
| 80 | A | A | 0.0000 | |
| 81 | N | A | -2.2901 | |
| 82 | N | A | -2.5630 | |
| 83 | R | A | -2.6632 | |
| 84 | G | A | 0.0000 | |
| 85 | W | A | -0.2026 | |
| 86 | C | A | 0.0000 | |
| 87 | A | A | 0.4311 | mutated: RA87A |
| 88 | S | A | -0.1021 | |
| 89 | S | A | 0.5329 | |
| 90 | C | A | 1.1115 | |
| 91 | F | A | 1.6250 | |
| 92 | S | A | 0.1277 | |
| 93 | H | A | -0.8651 | |
| 94 | A | A | -0.2681 | mutated: EA94A |
| 95 | Y | A | 0.4716 | |
| 96 | V | A | 1.2716 | |
| 97 | D | A | 1.2754 | |
| 98 | W | A | 2.0556 | |
| 99 | Y | A | 1.9099 | |
| 100 | Y | A | 1.1917 | |
| 101 | T | A | 1.2532 | |
| 102 | A | A | 0.6951 | |
| 103 | V | A | 0.0000 | |
| 104 | C | A | 0.0000 | |
| 105 | G | A | 0.1047 | |
| 106 | G | A | -0.1227 | |
| 107 | Y | A | 0.3339 | |
| 108 | F | A | 1.2360 | |
| 109 | C | A | 0.0000 | |
| 110 | C | A | 0.0000 | |
| 111 | R | A | -0.7714 | |
| 112 | P | A | -1.1877 | |
| 113 | K | A | -1.9412 |